Aliases for LOC105370047 Gene

Data sources for LOC105370047 Gene:

Subcategory (RNA class) for LOC105370047 Gene

ncRNA

Aliases for LOC105370047 Gene

External Ids for LOC105370047 Gene

Previous GeneCards Identifiers for LOC105370047 Gene

  • GC12U902475

Summaries for LOC105370047 Gene

GeneCards Summary for LOC105370047 Gene

LOC105370047 (Uncharacterized LOC105370047) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370047 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105370047 Gene

Genomics for LOC105370047 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105370047 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J124504 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +5.0 4953 24.5 CHD2 ZBTB10 FEZF1 CEBPA DEK IKZF1 BRCA1 ZEB1 ZIC2 ZNF610 EIF2B1 DDX55 NCOR2 TMED2-DT ATP6V0A2 ENSG00000270130 GTF2H3 TCTN2 ENSG00000270061 DHX37
GH12J124496 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.4 -12437 6.4 ETS1 ZIC2 CEBPB ZNF623 ZNF341 RXRA ZNF146 JUND RAD21 CTCF NCOR2 EIF2B1 DDX55 DHX37 TCTN2 ATP6V0A2 RILPL1 LOC105370047 piR-33614-071 lnc-NCOR2-4
GH12J124492 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.9 -17850 2.4 SP1 BCL11A NR2C1 MBD2 POLR2A ZIC2 CEBPB IRF4 RXRA EBF1 NCOR2 UBC LOC105370047 piR-33614-071 lnc-NCOR2-4 RFLNA
GH12J124478 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -30.8 -30811 4 IRF2 ZNF217 BHLHE40 ZBTB7B ZIC2 VEZF1 IRF4 SMAD4 SAP130 PAX8 UBC piR-33614-071 LOC105370047 NCOR2 RFLNA
GH12J124490 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -20.5 -20488 1.5 IKZF1 BHLHE40 CUX1 TAL1 RXRA ZBTB33 KLF9 FOXA2 ZNF316 ADNP NCOR2 LOC105370047 piR-33614-071 lnc-NCOR2-4 RFLNA
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370047 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105370047 Gene

Latest Assembly
chr12:124,511,651-124,516,861
(GRCh38/hg38)
Size:
5,211 bases
Orientation:
Plus strand

Genomic View for LOC105370047 Gene

Genes around LOC105370047 on UCSC Golden Path with GeneCards custom track
LOC105370047 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105370047 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370047 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370047 Gene

Proteins for LOC105370047 Gene

Post-translational modifications for LOC105370047 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370047 Gene

Domains & Families for LOC105370047 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105370047 Gene

Function for LOC105370047 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370047 Gene

Localization for LOC105370047 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370047 Gene

Pathways & Interactions for LOC105370047 Gene

PathCards logo

SuperPathways for LOC105370047 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105370047 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105370047 Gene

Drugs & Compounds for LOC105370047 Gene

No Compound Related Data Available

Transcripts for LOC105370047 Gene

LOC105370047 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370047 Gene

No ASD Table

Relevant External Links for LOC105370047 Gene

GeneLoc Exon Structure for
LOC105370047

No data available for mRNA/cDNA for LOC105370047 Gene

Expression for LOC105370047 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370047 Gene

Orthologs for LOC105370047 Gene

No data available for Orthologs and Evolution for LOC105370047 Gene

Paralogs for LOC105370047 Gene

No data available for Paralogs for LOC105370047 Gene

Variants for LOC105370047 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105370047 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370047 Gene

Disorders for LOC105370047 Gene

No disorders were found for LOC105370047 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370047 Gene

Publications for LOC105370047 Gene

No publications were found for LOC105370047 Gene.

No data available for Mastermind for LOC105370047 Gene

Products for LOC105370047 Gene

Sources for LOC105370047 Gene