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Aliases for LOC105370047 Gene

Subcategory (RNA class) for LOC105370047 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370047 Gene

  • Uncharacterized LOC105370047 3

External Ids for LOC105370047 Gene

Previous GeneCards Identifiers for LOC105370047 Gene

  • GC12U902475

Summaries for LOC105370047 Gene

GeneCards Summary for LOC105370047 Gene

LOC105370047 (Uncharacterized LOC105370047) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370047 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370047 Gene

Genomics for LOC105370047 Gene

GeneHancer (GH) Regulatory Elements for LOC105370047 Gene

Promoters and enhancers for LOC105370047 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J124504 Promoter/Enhancer 2.2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.3 4268 24.8 ZNF473 ZNF652 SP1 CTCF ZNF148 ZNF121 CEBPG CSDE1 ZNF384 NFIB EIF2B1 DDX55 NCOR2 TCTN2 TMED2-DT ATP6V0A2 ENSG00000270130 GTF2H3 ENSG00000270061 DHX37
GH12J124496 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.3 -13295 6.4 SP1 CBFA2T2 GLIS2 ZBTB33 ZNF600 ZIC2 ATF7 ZNF629 PATZ1 ZNF341 NCOR2 EIF2B1 DDX55 DHX37 TCTN2 ATP6V0A2 RILPL1 LOC105370047 ENSG00000255965 GC12M124443
GH12J124493 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.8 -18797 2.2 SP1 ZKSCAN8 ZNF687 NFIB RELA CREM MLLT1 EGR1 IKZF1 POLR2A NCOR2 UBC LOC105370047 ENSG00000255965 GC12M124443
GH12J124479 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -31.5 -31495 3.6 MTA3 ELF3 ZKSCAN8 ZNF148 NFIB RELA SP5 CREM MLLT1 ZBED1 LOC105370047 NCOR2 ENSG00000255965 GC12M124443
GH12J124487 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -24.6 -24596 2.2 MLLT1 SMARCA4 DPF2 ATF1 REST HDAC1 NR2C1 SOX6 CTBP1 E2F5 NCOR2 LOC105370047 ENSG00000255965 GC12M124443
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370047 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370047 Gene

Genomic Locations for LOC105370047 Gene
chr12:124,512,509-124,516,861
(GRCh38/hg38)
Size:
4,353 bases
Orientation:
Plus strand

Genomic View for LOC105370047 Gene

Genes around LOC105370047 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370047 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370047 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370047 Gene

Proteins for LOC105370047 Gene

Post-translational modifications for LOC105370047 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370047 Gene

Domains & Families for LOC105370047 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370047 Gene

Function for LOC105370047 Gene

Phenotypes From GWAS Catalog for LOC105370047 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370047 Gene

Localization for LOC105370047 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370047 Gene

Pathways & Interactions for LOC105370047 Gene

PathCards logo

SuperPathways for LOC105370047 Gene

No Data Available

Interacting Proteins for LOC105370047 Gene

Gene Ontology (GO) - Biological Process for LOC105370047 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370047 Gene

Drugs & Compounds for LOC105370047 Gene

No Compound Related Data Available

Transcripts for LOC105370047 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370047 Gene

No ASD Table

Relevant External Links for LOC105370047 Gene

GeneLoc Exon Structure for
LOC105370047

No data available for mRNA/cDNA for LOC105370047 Gene

Expression for LOC105370047 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370047 Gene

Orthologs for LOC105370047 Gene

No data available for Orthologs and Evolution for LOC105370047 Gene

Paralogs for LOC105370047 Gene

No data available for Paralogs for LOC105370047 Gene

Variants for LOC105370047 Gene

Sequence variations from dbSNP and Humsavar for LOC105370047 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000059858 -- 124,509,905(+) G/A upstream_transcript_variant
rs1000091984 -- 124,509,689(+) G/A upstream_transcript_variant
rs1000310423 -- 124,515,109(+) T/C genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000391542 -- 124,510,895(+) G/A upstream_transcript_variant
rs1000422830 -- 124,511,180(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370047 Gene

Disorders for LOC105370047 Gene

No disorders were found for LOC105370047 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370047 Gene

Publications for LOC105370047 Gene

No publications were found for LOC105370047 Gene.

No data available for External Links for LOC105370047 Gene

Products for LOC105370047 Gene

Sources for LOC105370047 Gene

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