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Aliases for LOC105370035 Gene

Subcategory (RNA class) for LOC105370035 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370035 Gene

  • Uncharacterized LOC105370035 3

External Ids for LOC105370035 Gene

Previous GeneCards Identifiers for LOC105370035 Gene

  • GC12U902251
  • GC12P121866
  • GC12P122340
  • GC12P121870
  • GC12P121873
  • GC12P121877
  • GC12P121978
  • GC12P122056
  • GC12P122107
  • GC12P122182
  • GC12P122262

Summaries for LOC105370035 Gene

GeneCards Summary for LOC105370035 Gene

LOC105370035 (Uncharacterized LOC105370035) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370035 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370035 Gene

Genomics for LOC105370035 Gene

GeneHancer (GH) Regulatory Elements for LOC105370035 Gene

Promoters and enhancers for LOC105370035 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J121858 Promoter/Enhancer 1.6 EPDnew ENCODE dbSUPER 600.7 +1.9 1869 2.4 ZNF652 ELF3 CEBPG SP7 SP1 SP5 ZNF644 KAT8 POLR2A PKNOX1 HPD LOC105370035 LINC01089 SETD1B PSMD9 ENSG00000256950 WDR66 TMEM120B ENSG00000278084
GH12J121859 Promoter/Enhancer 1 Ensembl dbSUPER 600.7 -0.6 -649 0.2 KAT8 RCOR2 KAT7 ZGPAT KDM3A RBPJ CREB1 ENSG00000256811 LOC105370035 HPD
GH12J121857 Enhancer 0.8 ENCODE dbSUPER 600.7 -1.6 -1620 0.2 CBFA2T2 NFE2L2 PKNOX1 ZNF316 NFE2 MAFG MAFK ZNF362 EMSY CBFA2T3 ENSG00000256811 LOC105370035 HPD GC12P122436
GH12J121855 Promoter 0.8 Ensembl 600.7 -1.8 -1849 0.2 ZNF121 ZNF316 NFE2 ZNF362 ENSG00000256811 LOC105370035 HPD GC12P122436
GH12J121856 Enhancer 0.7 ENCODE dbSUPER 600.7 -1.2 -1235 0.4 CBFA2T2 NFE2L2 PKNOX1 ZNF316 NFE2 ENSG00000256811 LOC105370035 HPD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370035 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370035 Gene

Genomic Locations for LOC105370035 Gene
chr12:121,857,750-121,870,211
(GRCh38/hg38)
Size:
12,462 bases
Orientation:
Plus strand
chr12:121,526,353-121,526,383
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for LOC105370035 Gene

Genes around LOC105370035 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370035 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370035 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370035 Gene

Proteins for LOC105370035 Gene

Post-translational modifications for LOC105370035 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370035 Gene

Domains & Families for LOC105370035 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370035 Gene

Function for LOC105370035 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370035 Gene

Localization for LOC105370035 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370035 Gene

Pathways & Interactions for LOC105370035 Gene

PathCards logo

SuperPathways for LOC105370035 Gene

No Data Available

Interacting Proteins for LOC105370035 Gene

Gene Ontology (GO) - Biological Process for LOC105370035 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370035 Gene

Drugs & Compounds for LOC105370035 Gene

No Compound Related Data Available

Transcripts for LOC105370035 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370035 Gene

No ASD Table

Relevant External Links for LOC105370035 Gene

GeneLoc Exon Structure for
LOC105370035

No data available for mRNA/cDNA for LOC105370035 Gene

Expression for LOC105370035 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370035 Gene

Orthologs for LOC105370035 Gene

No data available for Orthologs and Evolution for LOC105370035 Gene

Paralogs for LOC105370035 Gene

No data available for Paralogs for LOC105370035 Gene

Variants for LOC105370035 Gene

Sequence variations from dbSNP and Humsavar for LOC105370035 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1154510 pathogenic, benign, 4-Alpha-hydroxyphenylpyruvate hydroxylase deficiency, 4-Hydroxyphenylpyruvate dioxygenase deficiency 121,857,429(+) T/C intron_variant
rs117079110 likely-benign, Hypertyrosinemia, 4-Alpha-hydroxyphenylpyruvate hydroxylase deficiency 121,856,354(+) G/A non_coding_transcript_variant
rs11833399 benign, Hypertyrosinemia, 4-Alpha-hydroxyphenylpyruvate hydroxylase deficiency, 4-Hydroxyphenylpyruvate dioxygenase deficiency 121,854,779(+) C/T upstream_transcript_variant
rs1246785384 uncertain-significance, 4-Alpha-hydroxyphenylpyruvate hydroxylase deficiency, 4-Hydroxyphenylpyruvate dioxygenase deficiency 121,857,417(+) A/C/G intron_variant
rs140788110 benign, 4-Alpha-hydroxyphenylpyruvate hydroxylase deficiency, Hypertyrosinemia, 4-Hydroxyphenylpyruvate dioxygenase deficiency 121,854,703(+) C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370035 Gene

Disorders for LOC105370035 Gene

No disorders were found for LOC105370035 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370035 Gene

Publications for LOC105370035 Gene

No publications were found for LOC105370035 Gene.

No data available for External Links for LOC105370035 Gene

Products for LOC105370035 Gene

Sources for LOC105370035 Gene

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