Aliases for LOC105370027 Gene

Subcategory (RNA class) for LOC105370027 Gene

ncRNA

Aliases for LOC105370027 Gene

  • Uncharacterized LOC105370027 3

External Ids for LOC105370027 Gene

Previous GeneCards Identifiers for LOC105370027 Gene

  • GC12U902468

Summaries for LOC105370027 Gene

GeneCards Summary for LOC105370027 Gene

LOC105370027 (Uncharacterized LOC105370027) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370027 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105370027 Gene

Genomics for LOC105370027 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105370027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J119665 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 -2.1 -2143 10 SP1 CREB1 GATAD2A CTCF PRDM10 ZNF629 LEF1 IKZF1 NFKBIZ ZNF692 PRKAB1 piR-57461-054 RPLP0 TMEM233 ENSG00000248636 LOC105370027 HSALNG0094474 CIT
GH12J119664 Enhancer 0.6 ENCODE dbSUPER 0.7 +3.3 3332 0.1 SP1 NR2F6 HNF4A RXRA MAX ZNF83 ENSG00000248636 LOC105370027 PRKAB1 lnc-CIT-7 RN7SKP197 TMEM233
GH12J119659 Enhancer 0.8 Ensembl ENCODE 0.4 +8.1 8103 1.8 CTCF FOXA1 PRDM1 ZNF143 PKNOX1 REST TRIM22 RAD21 HMBOX1 GABPA PRKAB1 ENSG00000248636 LOC105370027 RN7SKP197 lnc-CIT-7 TMEM233
GH12J119662 Enhancer 0.6 dbSUPER 0.4 +5.5 5542 0.7 DPF2 HDAC1 CTBP1 MNT TRIM24 EHMT2 ZNF592 FOXK2 ZEB2 L3MBTL2 PRKAB1 ENSG00000248636 LOC105370027 lnc-CIT-7 RN7SKP197 TMEM233
GH12J119593 Promoter/Enhancer 1.2 EPDnew Ensembl ENCODE 0.2 +73.1 73099 3.8 PRDM10 EZH2 GABPA SCRT2 NR2F2 GABPB1 ZNF398 EGR1 PRKAB1 ENSG00000248636 TMEM233 piR-36588-110 LOC105370027
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370027 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105370027 Gene

Genomic Locations for LOC105370027 Gene
chr12:119,387,991-119,668,203
(GRCh38/hg38)
Size:
280,213 bases
Orientation:
Minus strand

Genomic View for LOC105370027 Gene

Genes around LOC105370027 on UCSC Golden Path with GeneCards custom track
LOC105370027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105370027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370027 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370027 Gene

Proteins for LOC105370027 Gene

Post-translational modifications for LOC105370027 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370027 Gene

Domains & Families for LOC105370027 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105370027 Gene

Function for LOC105370027 Gene

Phenotypes From GWAS Catalog for LOC105370027 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370027 Gene

Localization for LOC105370027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370027 Gene

Pathways & Interactions for LOC105370027 Gene

PathCards logo

SuperPathways for LOC105370027 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105370027 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105370027 Gene

Drugs & Compounds for LOC105370027 Gene

No Compound Related Data Available

Transcripts for LOC105370027 Gene

LOC105370027 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

mRNA/cDNA for LOC105370027 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370027 Gene

No ASD Table

Relevant External Links for LOC105370027 Gene

GeneLoc Exon Structure for
LOC105370027

Expression for LOC105370027 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370027 Gene

Orthologs for LOC105370027 Gene

No data available for Orthologs and Evolution for LOC105370027 Gene

Paralogs for LOC105370027 Gene

No data available for Paralogs for LOC105370027 Gene

Variants for LOC105370027 Gene

Additional dbSNP identifiers (rs#s) for LOC105370027 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370027 Gene

Disorders for LOC105370027 Gene

No disorders were found for LOC105370027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370027 Gene

Publications for LOC105370027 Gene

No publications were found for LOC105370027 Gene.

No data available for Mastermind for LOC105370027 Gene

Products for LOC105370027 Gene

Sources for LOC105370027 Gene