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Aliases for LOC105370025 Gene

Subcategory (RNA class) for LOC105370025 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370025 Gene

  • Uncharacterized LOC105370025 3

External Ids for LOC105370025 Gene

Previous GeneCards Identifiers for LOC105370025 Gene

  • GC12U902183

Summaries for LOC105370025 Gene

GeneCards Summary for LOC105370025 Gene

LOC105370025 (Uncharacterized LOC105370025) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370025 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370025 Gene

Genomics for LOC105370025 Gene

GeneHancer (GH) Regulatory Elements for LOC105370025 Gene

Promoters and enhancers for LOC105370025 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J119245 Enhancer 0.6 Ensembl 0.7 +4.4 4363 1 CEBPG SP1 CEBPA GATAD2A SOX13 USF1 ATF3 JUND HNF4A NFIL3 HSPB8 LOC105370024 ENSG00000257095 SRRM4 LOC105370025 ENSG00000256311 GC12P119226
GH12J119235 Enhancer 0.7 Ensembl ENCODE 0.4 +14.4 14363 2.6 CTCF TEAD1 ZNF189 TEAD3 TEAD2 ENSG00000256311 HSPB8 LOC105370024 GC12P119226 LOC105370025
GH12J119229 Enhancer 0.7 ENCODE 0.3 +20.5 20453 0.2 SP1 SIX5 ZNF384 ATF1 ZNF143 REST EHMT2 E2F5 USF1 MBD2 GCN1 SUDS3 GC12P119226 LOC105370025 ENSG00000256311
GH12J119225 Enhancer 0.4 Ensembl 0.3 +25.0 24963 1 GATA3 CTCF ZBTB40 GC12P119226 ENSG00000256609 HSPB8 LOC105370024 LOC105370026 LOC105370025 ENSG00000256311
GH12J119232 Enhancer 0.4 Ensembl 0.4 +18.0 17963 0.6 ZNF512 HLF ENSG00000256311 LOC105370024 HSPB8 GC12P119226 LOC105370025
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370025 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370025 Gene

Genomic Locations for LOC105370025 Gene
chr12:119,224,700-119,250,464
(GRCh38/hg38)
Size:
25,765 bases
Orientation:
Minus strand

Genomic View for LOC105370025 Gene

Genes around LOC105370025 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370025 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370025 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370025 Gene

Proteins for LOC105370025 Gene

Post-translational modifications for LOC105370025 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370025 Gene

Domains & Families for LOC105370025 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370025 Gene

Function for LOC105370025 Gene

Phenotypes From GWAS Catalog for LOC105370025 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370025 Gene

Localization for LOC105370025 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370025 Gene

Pathways & Interactions for LOC105370025 Gene

PathCards logo

SuperPathways for LOC105370025 Gene

No Data Available

Interacting Proteins for LOC105370025 Gene

Gene Ontology (GO) - Biological Process for LOC105370025 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370025 Gene

Drugs & Compounds for LOC105370025 Gene

No Compound Related Data Available

Transcripts for LOC105370025 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370025 Gene

No ASD Table

Relevant External Links for LOC105370025 Gene

GeneLoc Exon Structure for
LOC105370025

No data available for mRNA/cDNA for LOC105370025 Gene

Expression for LOC105370025 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370025 Gene

Orthologs for LOC105370025 Gene

No data available for Orthologs and Evolution for LOC105370025 Gene

Paralogs for LOC105370025 Gene

No data available for Paralogs for LOC105370025 Gene

Variants for LOC105370025 Gene

Sequence variations from dbSNP and Humsavar for LOC105370025 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000431821 -- 119,226,601(-) A/T non_coding_transcript_variant
rs1000491444 -- 119,252,026(-) A/G upstream_transcript_variant
rs1000541252 -- 119,224,109(-) T/C non_coding_transcript_variant
rs1000595913 -- 119,243,781(-) GCTTG/GCTTGCTTG intron_variant
rs1000742454 -- 119,233,810(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370025 Gene

Disorders for LOC105370025 Gene

No disorders were found for LOC105370025 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370025 Gene

Publications for LOC105370025 Gene

No publications were found for LOC105370025 Gene.

No data available for External Links for LOC105370025 Gene

Products for LOC105370025 Gene

Sources for LOC105370025 Gene

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