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Aliases for LOC105370024 Gene

Subcategory (RNA class) for LOC105370024 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370024 Gene

  • Uncharacterized LOC105370024 3
  • Novel Transcript 5
  • AC084880.4 5

External Ids for LOC105370024 Gene

Previous GeneCards Identifiers for LOC105370024 Gene

  • GC12U902065

Summaries for LOC105370024 Gene

GeneCards Summary for LOC105370024 Gene

LOC105370024 (Uncharacterized LOC105370024) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370024 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370024 Gene

Genomics for LOC105370024 Gene

GeneHancer (GH) Regulatory Elements for LOC105370024 Gene

Promoters and enhancers for LOC105370024 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J119235 Enhancer 0.7 Ensembl ENCODE 11.1 -59.6 -59617 2.6 CTCF TEAD1 ZNF189 TEAD3 TEAD2 ENSG00000256311 LOC105370024 HSPB8 GC12P119226 LOC105370025
GH12J119302 Enhancer 0.7 Ensembl ENCODE 10.3 -126.4 -126412 1 ZNF512 EZH2 USF1 POLR2A RCOR1 FOS USF2 LINC00934 LOC105370024 ENSG00000256311
GH12J119245 Enhancer 0.6 Ensembl 10.7 -69.6 -69617 1 CEBPG SP1 CEBPA GATAD2A SOX13 USF1 ATF3 JUND HNF4A NFIL3 LOC105370024 HSPB8 ENSG00000257095 SRRM4 LOC105370025 ENSG00000256311 GC12P119226
GH12J119145 Enhancer 0.5 Ensembl ENCODE 12.2 +31.2 31183 1.8 CBX8 LOC105370024 HSPB8 ENSG00000257095 SRRM4 GC12P119156 GC12M119082
GH12J119423 Enhancer 0.6 Ensembl 10.2 -247.2 -247157 0.7 SIX5 ZNF143 POLR2A HCFC1 ELF1 SUZ12 ETS1 THAP11 HSPB8 LOC105370024 CCDC60 TMEM233 LOC105370027 ENSG00000248636
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370024 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370024 Gene

Genomic Locations for LOC105370024 Gene
chr12:119,174,065-119,176,484
(GRCh38/hg38)
Size:
2,420 bases
Orientation:
Minus strand
chr12:119,611,870-119,614,289
(GRCh37/hg19)
Size:
2,420 bases
Orientation:
Minus strand

Genomic View for LOC105370024 Gene

Genes around LOC105370024 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370024 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370024 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370024 Gene

Proteins for LOC105370024 Gene

Post-translational modifications for LOC105370024 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370024 Gene

Domains & Families for LOC105370024 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370024 Gene

Function for LOC105370024 Gene

Phenotypes From GWAS Catalog for LOC105370024 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370024 Gene

Localization for LOC105370024 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370024 Gene

Pathways & Interactions for LOC105370024 Gene

PathCards logo

SuperPathways for LOC105370024 Gene

No Data Available

Interacting Proteins for LOC105370024 Gene

Gene Ontology (GO) - Biological Process for LOC105370024 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370024 Gene

Drugs & Compounds for LOC105370024 Gene

No Compound Related Data Available

Transcripts for LOC105370024 Gene

mRNA/cDNA for LOC105370024 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370024 Gene

No ASD Table

Relevant External Links for LOC105370024 Gene

GeneLoc Exon Structure for
LOC105370024

Expression for LOC105370024 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370024 Gene

Orthologs for LOC105370024 Gene

Evolution for LOC105370024 Gene

ENSEMBL:
Gene Tree for LOC105370024 (if available)
TreeFam:
Gene Tree for LOC105370024 (if available)

No data available for Orthologs for LOC105370024 Gene

Paralogs for LOC105370024 Gene

No data available for Paralogs for LOC105370024 Gene

Variants for LOC105370024 Gene

Sequence variations from dbSNP and Humsavar for LOC105370024 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000430198 -- 119,177,633(-) A/T upstream_transcript_variant
rs1000890440 -- 119,176,832(-) C/T upstream_transcript_variant
rs1001038424 -- 119,176,378(-) A/G intron_variant
rs1001192343 -- 119,177,906(-) G/A upstream_transcript_variant
rs1001474960 -- 119,178,147(-) G/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370024 Gene

Disorders for LOC105370024 Gene

No disorders were found for LOC105370024 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370024 Gene

Publications for LOC105370024 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

No data available for External Links for LOC105370024 Gene

Products for LOC105370024 Gene

Sources for LOC105370024 Gene

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