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Aliases for LOC105370005 Gene

Subcategory (RNA class) for LOC105370005 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370005 Gene

  • Uncharacterized LOC105370005 3

External Ids for LOC105370005 Gene

Previous GeneCards Identifiers for LOC105370005 Gene

  • GC12U902117

Summaries for LOC105370005 Gene

GeneCards Summary for LOC105370005 Gene

LOC105370005 (Uncharacterized LOC105370005) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370005 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370005 Gene

Genomics for LOC105370005 Gene

GeneHancer (GH) Regulatory Elements for LOC105370005 Gene

Promoters and enhancers for LOC105370005 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J116348 Enhancer 0.7 Ensembl ENCODE 600.7 +1.6 1580 1.4 ZIC2 OSR2 RXRA TEAD3 LOC105370005 MED13L GC12P116283
GH12J116346 Enhancer 1.1 Ensembl ENCODE 0.7 +4.0 4026 1.4 CBFA2T2 MLLT1 GTF2F1 ZNF384 TRIM24 SP1 PRDM1 SMARCA4 FOSL2 IKZF1 MED13L LOC105370005 GC12P116283
GH12J116358 Enhancer 1.3 ENCODE dbSUPER 0.4 -9.3 -9297 3.7 CC2D1A ZFX ZKSCAN8 CBFA2T2 ZNF148 MLLT1 ZNF121 CEBPG GTF2F1 CSDE1 MED13L FBXW8 ENSG00000258034 LOC105370005 ENSG00000258346
GH12J116331 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 +15.0 15026 11.4 CC2D1A MLLT1 ZNF121 GTF2F1 NCOA3 MAFK RELA CREM EGR1 MTA1 MAP1LC3B2 FBXW8 MED13L LOC105370005 GC12P116283
GH12J116354 Enhancer 0.8 Ensembl 0.7 -4.2 -4174 1.4 ZNF148 SP1 SMARCA4 RXRA IKZF1 HDAC1 FOXA2 MGA CTBP1 EGR1 LOC105370005 ENSG00000258346
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370005 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370005 Gene

Genomic Locations for LOC105370005 Gene
chr12:116,340,202-116,350,727
(GRCh38/hg38)
Size:
10,526 bases
Orientation:
Minus strand

Genomic View for LOC105370005 Gene

Genes around LOC105370005 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370005 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370005 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370005 Gene

Proteins for LOC105370005 Gene

Post-translational modifications for LOC105370005 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370005 Gene

Domains & Families for LOC105370005 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370005 Gene

Function for LOC105370005 Gene

Phenotypes From GWAS Catalog for LOC105370005 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370005 Gene

Localization for LOC105370005 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370005 Gene

Pathways & Interactions for LOC105370005 Gene

PathCards logo

SuperPathways for LOC105370005 Gene

No Data Available

Interacting Proteins for LOC105370005 Gene

Gene Ontology (GO) - Biological Process for LOC105370005 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370005 Gene

Drugs & Compounds for LOC105370005 Gene

No Compound Related Data Available

Transcripts for LOC105370005 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370005 Gene

No ASD Table

Relevant External Links for LOC105370005 Gene

GeneLoc Exon Structure for
LOC105370005

No data available for mRNA/cDNA for LOC105370005 Gene

Expression for LOC105370005 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370005 Gene

Orthologs for LOC105370005 Gene

No data available for Orthologs and Evolution for LOC105370005 Gene

Paralogs for LOC105370005 Gene

No data available for Paralogs for LOC105370005 Gene

Variants for LOC105370005 Gene

Sequence variations from dbSNP and Humsavar for LOC105370005 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000001602 -- 116,346,351(-) A/T intron_variant
rs1000121395 -- 116,340,464(-) C/T intron_variant
rs1000459382 -- 116,342,017(-) C/T intron_variant
rs1000478048 -- 116,346,616(-) C/G/T intron_variant
rs1001256817 -- 116,352,471(-) A/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370005 Gene

Disorders for LOC105370005 Gene

No disorders were found for LOC105370005 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370005 Gene

Publications for LOC105370005 Gene

No publications were found for LOC105370005 Gene.

No data available for External Links for LOC105370005 Gene

Products for LOC105370005 Gene

Sources for LOC105370005 Gene

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