Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105370000 Gene

Subcategory (RNA class) for LOC105370000 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105370000 Gene

  • Uncharacterized LOC105370000 3

External Ids for LOC105370000 Gene

Previous GeneCards Identifiers for LOC105370000 Gene

  • GC12U902257

Summaries for LOC105370000 Gene

GeneCards Summary for LOC105370000 Gene

LOC105370000 (Uncharacterized LOC105370000) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370000 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370000 Gene

Genomics for LOC105370000 Gene

GeneHancer (GH) Regulatory Elements for LOC105370000 Gene

Promoters and enhancers for LOC105370000 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J114710 Enhancer 0.6 ENCODE 600.7 -2.0 -1968 3.4 SP1 CEBPG PKNOX1 ZIC2 CEBPA CTBP1 RAD51 USF1 DPF2 GATAD2B ENSG00000257817 LOC105370000 GC12P114686
GH12J114732 Enhancer 0.5 dbSUPER 0.4 +18.9 18891 0.5 GABPA GABPB1 RARA ETV4 ETV5 ELF1 NR2F6 TBX3 LOC105369999 ENSG00000257817 LOC105370000
GH12J114735 Enhancer 0.5 FANTOM5 0.3 +21.4 21404 0.1 EZH2 USF1 POU5F1 LOC105369999 ENSG00000257817 LOC105370000
GH12J114725 Enhancer 0.4 Ensembl 0.4 +12.1 12060 0.2 ZEB2 ZNF366 TBX3 LOC105369999 LOC105370000 ENSG00000257817
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105370000 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105370000 Gene

Genomic Locations for LOC105370000 Gene
chr12:114,713,841-114,734,111
(GRCh38/hg38)
Size:
20,271 bases
Orientation:
Plus strand

Genomic View for LOC105370000 Gene

Genes around LOC105370000 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370000 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370000 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370000 Gene

Proteins for LOC105370000 Gene

Post-translational modifications for LOC105370000 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370000 Gene

Domains & Families for LOC105370000 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370000 Gene

Function for LOC105370000 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370000 Gene

Localization for LOC105370000 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370000 Gene

Pathways & Interactions for LOC105370000 Gene

PathCards logo

SuperPathways for LOC105370000 Gene

No Data Available

Interacting Proteins for LOC105370000 Gene

Gene Ontology (GO) - Biological Process for LOC105370000 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370000 Gene

Drugs & Compounds for LOC105370000 Gene

No Compound Related Data Available

Transcripts for LOC105370000 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370000 Gene

No ASD Table

Relevant External Links for LOC105370000 Gene

GeneLoc Exon Structure for
LOC105370000

No data available for mRNA/cDNA for LOC105370000 Gene

Expression for LOC105370000 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370000 Gene

Orthologs for LOC105370000 Gene

No data available for Orthologs and Evolution for LOC105370000 Gene

Paralogs for LOC105370000 Gene

No data available for Paralogs for LOC105370000 Gene

Variants for LOC105370000 Gene

Sequence variations from dbSNP and Humsavar for LOC105370000 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs112192237 uncertain-significance, Ulnar-mammary syndrome 114,684,072(+) GAG/GAGGGAGAG/GAGGGAGAGAG genic_upstream_transcript_variant, intron_variant
rs11356115 benign, uncertain-significance, Ulnar-mammary syndrome 114,683,791(+) AAAAAAAAAAAAA/AAAAAAAAA/AAAAAAAAAAA/AAAAAAAAAAAA/AAAAAAAAAAAAAA genic_upstream_transcript_variant, intron_variant
rs12366395 benign, Ulnar-mammary syndrome 114,683,398(+) A/G genic_upstream_transcript_variant, intron_variant
rs142592809 benign-likely-benign, Ulnar-mammary syndrome 114,683,140(+) G/A genic_upstream_transcript_variant, intron_variant
rs201388921 benign, likely-benign, not specified, Ulnar-mammary syndrome 114,683,030(+) C/A/T genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105370000 Gene

Disorders for LOC105370000 Gene

No disorders were found for LOC105370000 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370000 Gene

Publications for LOC105370000 Gene

No publications were found for LOC105370000 Gene.

No data available for External Links for LOC105370000 Gene

Products for LOC105370000 Gene

Sources for LOC105370000 Gene

Content
Loading form....