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Aliases for LOC105369998 Gene

Subcategory (RNA class) for LOC105369998 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369998 Gene

  • Uncharacterized LOC105369998 3

External Ids for LOC105369998 Gene

Previous GeneCards Identifiers for LOC105369998 Gene

  • GC12U902014

Summaries for LOC105369998 Gene

GeneCards Summary for LOC105369998 Gene

LOC105369998 (Uncharacterized LOC105369998) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369998 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369998 Gene

Genomics for LOC105369998 Gene

GeneHancer (GH) Regulatory Elements for LOC105369998 Gene

Promoters and enhancers for LOC105369998 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J114447 Promoter/Enhancer 1.1 VISTA EPDnew dbSUPER 600.7 +0.6 627 1.2 NRF1 EZH2 CBFA2T3 LOC105369998 GC12M114445 TBX5 GC12M114444
GH12J114395 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.3 43345 20.3 SP1 PRDM1 POLR2A NRF1 CTCF EZH2 RFX1 USF1 ZSCAN29 ZNF217 TBX5 TBX5-AS1 GC12M114409 GC12M114376 LOC105369998
GH12J114429 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +17.1 17053 3.6 FOS ZMYM3 GC12M114444 LOC105369998 GC12M114409
GH12J114438 Enhancer 0.6 dbSUPER 0.4 +6.3 6304 6.8 EGR1 CEBPG ZNF512 EZH2 ZFHX2 ZNF366 CEBPB HDAC2 CBFA2T3 TBX5-AS1 TBX5 GC12M114444 LOC105369998 GC12M114445 GC12M114409
GH12J114424 Enhancer 0.6 Ensembl dbSUPER 0.3 +23.2 23245 0.8 CEBPG CEBPA GC12M114409 GC12M114444 LOC105369998
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369998 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369998 Gene

Genomic Locations for LOC105369998 Gene
chr12:114,414,357-114,448,646
(GRCh38/hg38)
Size:
34,290 bases
Orientation:
Minus strand

Genomic View for LOC105369998 Gene

Genes around LOC105369998 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369998 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369998 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369998 Gene

Proteins for LOC105369998 Gene

Post-translational modifications for LOC105369998 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369998 Gene

Domains & Families for LOC105369998 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369998 Gene

Function for LOC105369998 Gene

Phenotypes From GWAS Catalog for LOC105369998 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369998 Gene

Localization for LOC105369998 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369998 Gene

Pathways & Interactions for LOC105369998 Gene

PathCards logo

SuperPathways for LOC105369998 Gene

No Data Available

Interacting Proteins for LOC105369998 Gene

Gene Ontology (GO) - Biological Process for LOC105369998 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369998 Gene

Drugs & Compounds for LOC105369998 Gene

No Compound Related Data Available

Transcripts for LOC105369998 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369998 Gene

No ASD Table

Relevant External Links for LOC105369998 Gene

GeneLoc Exon Structure for
LOC105369998

No data available for mRNA/cDNA for LOC105369998 Gene

Expression for LOC105369998 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369998 Gene

Orthologs for LOC105369998 Gene

No data available for Orthologs and Evolution for LOC105369998 Gene

Paralogs for LOC105369998 Gene

No data available for Paralogs for LOC105369998 Gene

Variants for LOC105369998 Gene

Sequence variations from dbSNP and Humsavar for LOC105369998 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000084560 -- 114,449,868(-) A/C upstream_transcript_variant
rs1000164535 -- 114,431,388(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000277898 -- 114,413,979(-) G/A/T downstream_transcript_variant
rs1000444086 -- 114,430,991(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000609720 -- 114,448,834(-) T/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369998 Gene

Disorders for LOC105369998 Gene

No disorders were found for LOC105369998 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369998 Gene

Publications for LOC105369998 Gene

No publications were found for LOC105369998 Gene.

No data available for External Links for LOC105369998 Gene

Products for LOC105369998 Gene

Sources for LOC105369998 Gene

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