Aliases for LOC105369983 Gene

Subcategory (RNA class) for LOC105369983 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369983 Gene

  • Uncharacterized LOC105369983 3

External Ids for LOC105369983 Gene

Previous GeneCards Identifiers for LOC105369983 Gene

  • GC12U902164

Summaries for LOC105369983 Gene

GeneCards Summary for LOC105369983 Gene

LOC105369983 (Uncharacterized LOC105369983) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105369983 include Epileptic Encephalopathy, Early Infantile, 67.

Additional gene information for LOC105369983 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369983 Gene

Genomics for LOC105369983 Gene

GeneHancer (GH) Regulatory Elements for LOC105369983 Gene

Promoters and enhancers for LOC105369983 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J111319 Enhancer 0.2 Ensembl 750.6 +0.8 761 0.8 LOC105369983 lnc-FAM109A-3 RF00017-1272 CUX2
GH12J111313 Enhancer 0.7 ENCODE 0.4 +6.2 6210 0.2 CTCF MAX RAD21 CEBPG SP7 CEBPA REST TRIM22 ZNF143 CEBPB lnc-FAM109A-3 LOC105369983 MIR6760 CUX2 RF00017-1272
GH12J111331 Enhancer 0.7 Ensembl ENCODE 0.4 -11.1 -11147 0.6 CTCF RAD21 GLIS2 REST ZBTB17 SMC3 SIN3A GLIS1 ZNF2 TMEM116 PHETA1 RNA5SP373 LOC105369983 RF00017-1272 CUX2
GH12J111298 Enhancer 0.7 Ensembl ENCODE 0.3 +21.2 21215 0.7 CTCF RAD21 REST ZNF692 ZNF10 SMC3 ZFP69B ZNF143 SIN3A GLIS1 piR-48759-070 lnc-FAM109A-3 LOC105369983 RF00017-1273 CUX2 RF00017-1272
GH12J111285 Enhancer 0.6 Ensembl ENCODE 0.3 +35.7 35662 2.6 ZIC2 PRDM10 ZKSCAN1 GLIS1 CUX2 MYL2 TMEM116 piR-48759-070 RF00017-1273 lnc-FAM109A-3 LOC105369983 RF00017-1272
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369983 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369983 Gene

Genomic Locations for LOC105369983 Gene
chr12:111,285,227-111,320,162
(GRCh38/hg38)
Size:
34,936 bases
Orientation:
Minus strand

Genomic View for LOC105369983 Gene

Genes around LOC105369983 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369983 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369983 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369983 Gene

Proteins for LOC105369983 Gene

Post-translational modifications for LOC105369983 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369983 Gene

Domains & Families for LOC105369983 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369983 Gene

Function for LOC105369983 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369983 Gene

Localization for LOC105369983 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369983 Gene

Pathways & Interactions for LOC105369983 Gene

PathCards logo

SuperPathways for LOC105369983 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369983 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369983 Gene

Drugs & Compounds for LOC105369983 Gene

No Compound Related Data Available

Transcripts for LOC105369983 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369983 Gene

No ASD Table

Relevant External Links for LOC105369983 Gene

GeneLoc Exon Structure for
LOC105369983

No data available for mRNA/cDNA for LOC105369983 Gene

Expression for LOC105369983 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369983 Gene

Orthologs for LOC105369983 Gene

No data available for Orthologs and Evolution for LOC105369983 Gene

Paralogs for LOC105369983 Gene

No data available for Paralogs for LOC105369983 Gene

Variants for LOC105369983 Gene

Sequence variations from dbSNP and Humsavar for LOC105369983 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1565909334 likely-pathogenic, EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 67 111,310,550(-) G/A intron_variant
rs1000014126 -- 111,309,599(-) T/C intron_variant
rs1000082180 -- 111,317,459(-) C/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000112105 -- 111,318,227(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000196578 -- 111,297,501(-) G/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369983 Gene

Disorders for LOC105369983 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105369983 Gene - From: GeneCards

Disorder Aliases PubMed IDs
epileptic encephalopathy, early infantile, 67
  • eiee67
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105369983: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369983 Gene

Publications for LOC105369983 Gene

No publications were found for LOC105369983 Gene.

No data available for External Links for LOC105369983 Gene

Products for LOC105369983 Gene

Sources for LOC105369983 Gene