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Aliases for LOC105369975 Gene

Subcategory (RNA class) for LOC105369975 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369975 Gene

  • Uncharacterized LOC105369975 3

External Ids for LOC105369975 Gene

Previous GeneCards Identifiers for LOC105369975 Gene

  • GC12U902466

Summaries for LOC105369975 Gene

GeneCards Summary for LOC105369975 Gene

LOC105369975 (Uncharacterized LOC105369975) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369975 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369975 Gene

Genomics for LOC105369975 Gene

GeneHancer (GH) Regulatory Elements for LOC105369975 Gene

Promoters and enhancers for LOC105369975 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J109844 Enhancer 1.2 ENCODE dbSUPER 0.7 -2.1 -2068 1.1 CTCF ZNF148 ZNF121 AHR SP7 KLF14 RAD21 IKZF1 GLIS2 RXRA GIT2 LOC105369975 PIR37961
GH12J109840 Enhancer 0.8 ENCODE dbSUPER 0.7 +2.7 2667 1.3 RFX1 RFX3 RCOR1 BMI1 ZNF623 TCF7L2 BCOR ZNF768 TFAP4 ZNF513 GPN3 GLTP UBE3B LOC105369975 TRPV4
GH12J109853 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -9.9 -9928 0.6 CC2D1A CTCF RAD21 REST TRIM22 SAP130 SMC3 BCOR ZNF654 ZNF143 GLTP ENSG00000249094 TCHP GIT2 PIR37961 LOC105369975
GH12J109847 Enhancer 0.6 dbSUPER 0.7 -4.3 -4286 1.1 IKZF1 IKZF2 PKNOX1 NR2F1 NBN NFIC ATF7 ZNF217 TARDBP GLTP ARPC3 LOC105369975 PIR37961
GH12J109836 Enhancer 0.7 ENCODE 0.4 +5.3 5318 2.2 ZNF121 CEBPG MAFK CEBPA SOX13 CEBPB JUN SP1 JUND ZKSCAN8 GLTP TRPV4 HVCN1 LOC105369975
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369975 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369975 Gene

Genomic Locations for LOC105369975 Gene
chr12:109,840,327-109,843,373
(GRCh38/hg38)
Size:
3,047 bases
Orientation:
Minus strand

Genomic View for LOC105369975 Gene

Genes around LOC105369975 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369975 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369975 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369975 Gene

Proteins for LOC105369975 Gene

Post-translational modifications for LOC105369975 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369975 Gene

Domains & Families for LOC105369975 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369975 Gene

Function for LOC105369975 Gene

Phenotypes From GWAS Catalog for LOC105369975 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369975 Gene

Localization for LOC105369975 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369975 Gene

Pathways & Interactions for LOC105369975 Gene

PathCards logo

SuperPathways for LOC105369975 Gene

No Data Available

Interacting Proteins for LOC105369975 Gene

Gene Ontology (GO) - Biological Process for LOC105369975 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369975 Gene

Drugs & Compounds for LOC105369975 Gene

No Compound Related Data Available

Transcripts for LOC105369975 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369975 Gene

No ASD Table

Relevant External Links for LOC105369975 Gene

GeneLoc Exon Structure for
LOC105369975

No data available for mRNA/cDNA for LOC105369975 Gene

Expression for LOC105369975 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369975 Gene

Orthologs for LOC105369975 Gene

No data available for Orthologs and Evolution for LOC105369975 Gene

Paralogs for LOC105369975 Gene

No data available for Paralogs for LOC105369975 Gene

Variants for LOC105369975 Gene

Sequence variations from dbSNP and Humsavar for LOC105369975 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000964334 -- 109,843,063(-) C/A intron_variant
rs1001059021 -- 109,842,710(-) T/C intron_variant
rs1001280478 -- 109,842,208(-) C/T intron_variant
rs1002832909 -- 109,840,021(-) C/T downstream_transcript_variant
rs1003045552 -- 109,842,498(-) G/ intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369975 Gene

Disorders for LOC105369975 Gene

No disorders were found for LOC105369975 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369975 Gene

Publications for LOC105369975 Gene

No publications were found for LOC105369975 Gene.

No data available for External Links for LOC105369975 Gene

Products for LOC105369975 Gene

Sources for LOC105369975 Gene

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