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Aliases for LOC105369974 Gene

Subcategory (RNA class) for LOC105369974 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369974 Gene

  • Uncharacterized LOC105369974 3

External Ids for LOC105369974 Gene

Previous GeneCards Identifiers for LOC105369974 Gene

  • GC12U902256

Summaries for LOC105369974 Gene

GeneCards Summary for LOC105369974 Gene

LOC105369974 (Uncharacterized LOC105369974) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369974 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369974 Gene

Genomics for LOC105369974 Gene

GeneHancer (GH) Regulatory Elements for LOC105369974 Gene

Promoters and enhancers for LOC105369974 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J109130 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.0 22 3.4 SP1 GLIS2 RXRA ZIC2 SCRT2 CHD2 SCRT1 ATF3 YY1 POLR2A ACACB LOC105369974 ALKBH2 UNG MYO1H TRPV4 ENSG00000256139 GC12P109057 GC12P109058
GH12J109109 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.4 17434 10.1 ZFX CTCF ELF3 MNT ZNF148 POLR2A ZNF121 CEBPG CSDE1 AHR ACACB UBE3B MYO1H ALKBH2 UNG DAO GC12M109089 ENSG00000256139 LOC105369974 GC12P109058
GH12J109133 Enhancer 0.9 Ensembl dbSUPER 0.7 -2.3 -2331 1.2 CTCF SP1 RXRA REST JUND YY1 ZBTB33 RAD21 GABPA SMC3 MYO1H ACACB LOC105369974 GC12M109152 GC12P109057 GC12P109058
GH12J109126 Enhancer 0.7 ENCODE dbSUPER 0.7 +4.9 4918 0.2 SP1 RXRA RAD21 ZNF664 HNF4A ALKBH2 UNG MYO1H TRPV4 ACACB LOC105369974 ENSG00000256139 GC12P109057 GC12P109058
GH12J109144 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -13.4 -13432 1.8 CEBPG SP1 RXRA FOXA2 JUND ATF3 YY1 ZBTB33 RAD21 HNF4A ACACB MYO1H GC12M109152 LOC105369974 GC12P109057 GC12P109058
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369974 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369974 Gene

Genomic Locations for LOC105369974 Gene
chr12:109,118,687-109,131,869
(GRCh38/hg38)
Size:
13,183 bases
Orientation:
Minus strand

Genomic View for LOC105369974 Gene

Genes around LOC105369974 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369974 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369974 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369974 Gene

Proteins for LOC105369974 Gene

Post-translational modifications for LOC105369974 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369974 Gene

Domains & Families for LOC105369974 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369974 Gene

Function for LOC105369974 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369974 Gene

Localization for LOC105369974 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369974 Gene

Pathways & Interactions for LOC105369974 Gene

PathCards logo

SuperPathways for LOC105369974 Gene

No Data Available

Interacting Proteins for LOC105369974 Gene

Gene Ontology (GO) - Biological Process for LOC105369974 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369974 Gene

Drugs & Compounds for LOC105369974 Gene

No Compound Related Data Available

Transcripts for LOC105369974 Gene

mRNA/cDNA for LOC105369974 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369974 Gene

No ASD Table

Relevant External Links for LOC105369974 Gene

GeneLoc Exon Structure for
LOC105369974

Expression for LOC105369974 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369974 Gene

Orthologs for LOC105369974 Gene

No data available for Orthologs and Evolution for LOC105369974 Gene

Paralogs for LOC105369974 Gene

No data available for Paralogs for LOC105369974 Gene

Variants for LOC105369974 Gene

Sequence variations from dbSNP and Humsavar for LOC105369974 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000124815 -- 109,119,751(-) G/T intron_variant
rs1000362934 -- 109,126,014(-) G/A non_coding_transcript_variant
rs1000901106 -- 109,121,990(-) A/C/G intron_variant
rs1001204978 -- 109,126,691(-) A/T non_coding_transcript_variant
rs1001253723 -- 109,120,129(-) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369974 Gene

Disorders for LOC105369974 Gene

No disorders were found for LOC105369974 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369974 Gene

Publications for LOC105369974 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

No data available for External Links for LOC105369974 Gene

Products for LOC105369974 Gene

Sources for LOC105369974 Gene

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