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Aliases for LOC105369961 Gene

Subcategory (RNA class) for LOC105369961 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369961 Gene

  • Uncharacterized LOC105369961 3

External Ids for LOC105369961 Gene

Previous GeneCards Identifiers for LOC105369961 Gene

  • GC12U902320

Summaries for LOC105369961 Gene

GeneCards Summary for LOC105369961 Gene

LOC105369961 (Uncharacterized LOC105369961) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369961 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369961 Gene

Genomics for LOC105369961 Gene

GeneHancer (GH) Regulatory Elements for LOC105369961 Gene

Promoters and enhancers for LOC105369961 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J106854 Enhancer 1.1 Ensembl ENCODE 0.3 +30.3 30272 1.7 ELF3 CEBPG ZNF24 SP1 HNF1A PPARG ZNF644 KAT8 HMG20B SOX13 GC12M106848 POLR3B ENSG00000260329 LOC105369961 RIC8B
GH12J106861 Enhancer 0.8 Ensembl ENCODE 0.3 +23.0 23004 1.8 CEBPA SP1 FOXA2 FOSL2 JUND KDM1A PRDM6 SOX5 ENSG00000260329 RIC8B POLR3B TMEM263 GC12M106848 LOC105369961
GH12J106891 Enhancer 0.5 ENCODE 0.4 -6.9 -6935 1.1 ZNF629 ATF2 ZNF623 ZFHX2 GLIS1 ZMYM3 EGR2 TMEM263 POLR3B GC12P106896 LOC105369961
GH12J106864 Enhancer 0.6 Ensembl 0.4 +16.1 16104 9.6 PRDM1 CEBPG POLR2A ZNF600 ZNF24 MNT FOS JUNB FOSL2 CEBPB TMEM263 POLR3B RIC8B ENSG00000260329 LOC105369961 GC12M106848
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369961 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369961 Gene

Genomic Locations for LOC105369961 Gene
chr12:106,862,622-106,885,505
(GRCh38/hg38)
Size:
22,884 bases
Orientation:
Minus strand

Genomic View for LOC105369961 Gene

Genes around LOC105369961 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369961 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369961 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369961 Gene

Proteins for LOC105369961 Gene

Post-translational modifications for LOC105369961 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369961 Gene

Domains & Families for LOC105369961 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369961 Gene

Function for LOC105369961 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369961 Gene

Localization for LOC105369961 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369961 Gene

Pathways & Interactions for LOC105369961 Gene

PathCards logo

SuperPathways for LOC105369961 Gene

No Data Available

Interacting Proteins for LOC105369961 Gene

Gene Ontology (GO) - Biological Process for LOC105369961 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369961 Gene

Drugs & Compounds for LOC105369961 Gene

No Compound Related Data Available

Transcripts for LOC105369961 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369961 Gene

No ASD Table

Relevant External Links for LOC105369961 Gene

GeneLoc Exon Structure for
LOC105369961

No data available for mRNA/cDNA for LOC105369961 Gene

Expression for LOC105369961 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369961 Gene

Orthologs for LOC105369961 Gene

No data available for Orthologs and Evolution for LOC105369961 Gene

Paralogs for LOC105369961 Gene

No data available for Paralogs for LOC105369961 Gene

Variants for LOC105369961 Gene

Sequence variations from dbSNP and Humsavar for LOC105369961 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000402599 -- 106,879,975(-) G/A intron_variant
rs1000447137 -- 106,871,398(-) T/C intron_variant
rs1000458595 -- 106,870,765(-) A/G intron_variant
rs1000940360 -- 106,874,063(-) T/G intron_variant
rs1001309022 -- 106,874,460(-) C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369961 Gene

Disorders for LOC105369961 Gene

No disorders were found for LOC105369961 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369961 Gene

Publications for LOC105369961 Gene

No publications were found for LOC105369961 Gene.

No data available for External Links for LOC105369961 Gene

Products for LOC105369961 Gene

Sources for LOC105369961 Gene

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