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Aliases for LOC105369953 Gene

Subcategory (RNA class) for LOC105369953 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369953 Gene

  • Uncharacterized LOC105369953 3

External Ids for LOC105369953 Gene

Previous GeneCards Identifiers for LOC105369953 Gene

  • GC12U902011

Summaries for LOC105369953 Gene

GeneCards Summary for LOC105369953 Gene

LOC105369953 (Uncharacterized LOC105369953) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369953 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369953 Gene

Genomics for LOC105369953 Gene

GeneHancer (GH) Regulatory Elements for LOC105369953 Gene

Promoters and enhancers for LOC105369953 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J105198 Enhancer 0.7 ENCODE dbSUPER 600.7 -0.7 -658 2.6 ZNF652 ZFHX2 TFAP4 FOS KDM1A EGR2 LOC105369953 WASHC4 APPL2 C12orf75 GC12P105154
GH12J105210 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +14.1 14078 6.9 SP1 CREB1 RXRA RFX1 FOXA2 SOX13 CEBPB RCOR1 BMI1 JUND PIR46520 WASHC4 APPL2 C12orf75 GC12P105208 LOC105369953
GH12J105203 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +5.4 5427 3.1 REST EHMT2 APPL2 WASHC4 C12orf75 GC12P105208 LOC105369953
GH12J105208 Enhancer 0.4 dbSUPER 0.4 +9.2 9230 1.4 PRDM1 TCF7L2 GC12P105208 WASHC4 PIR46520 LOC105369953 APPL2
GH12J105184 Enhancer 0.2 Ensembl 0.4 -15.8 -15760 0.2 APPL2 WASHC4 LOC105369953 GC12P105154
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369953 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369953 Gene

Genomic Locations for LOC105369953 Gene
chr12:105,200,061-105,211,913
(GRCh38/hg38)
Size:
11,853 bases
Orientation:
Plus strand

Genomic View for LOC105369953 Gene

Genes around LOC105369953 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369953 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369953 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369953 Gene

Proteins for LOC105369953 Gene

Post-translational modifications for LOC105369953 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369953 Gene

Domains & Families for LOC105369953 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369953 Gene

Function for LOC105369953 Gene

Phenotypes From GWAS Catalog for LOC105369953 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369953 Gene

Localization for LOC105369953 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369953 Gene

Pathways & Interactions for LOC105369953 Gene

PathCards logo

SuperPathways for LOC105369953 Gene

No Data Available

Interacting Proteins for LOC105369953 Gene

Gene Ontology (GO) - Biological Process for LOC105369953 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369953 Gene

Drugs & Compounds for LOC105369953 Gene

No Compound Related Data Available

Transcripts for LOC105369953 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369953 Gene

No ASD Table

Relevant External Links for LOC105369953 Gene

GeneLoc Exon Structure for
LOC105369953

No data available for mRNA/cDNA for LOC105369953 Gene

Expression for LOC105369953 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369953 Gene

Orthologs for LOC105369953 Gene

No data available for Orthologs and Evolution for LOC105369953 Gene

Paralogs for LOC105369953 Gene

No data available for Paralogs for LOC105369953 Gene

Variants for LOC105369953 Gene

Sequence variations from dbSNP and Humsavar for LOC105369953 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000327100 -- 105,203,337(+) T/C intron_variant
rs1000370326 -- 105,201,930(+) /T intron_variant
rs1001526251 -- 105,200,737(+) G/A/C non_coding_transcript_variant
rs1002221803 -- 105,204,884(+) T/C intron_variant
rs1002838980 -- 105,200,148(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369953 Gene

Disorders for LOC105369953 Gene

No disorders were found for LOC105369953 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369953 Gene

Publications for LOC105369953 Gene

No publications were found for LOC105369953 Gene.

No data available for External Links for LOC105369953 Gene

Products for LOC105369953 Gene

Sources for LOC105369953 Gene

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