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Aliases for LOC105369945 Gene

Subcategory (RNA class) for LOC105369945 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369945 Gene

  • Uncharacterized LOC105369945 3

External Ids for LOC105369945 Gene

Previous GeneCards Identifiers for LOC105369945 Gene

  • GC12U902049

Summaries for LOC105369945 Gene

GeneCards Summary for LOC105369945 Gene

LOC105369945 (Uncharacterized LOC105369945) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369945 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369945 Gene

Genomics for LOC105369945 Gene

GeneHancer (GH) Regulatory Elements for LOC105369945 Gene

Promoters and enhancers for LOC105369945 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J103492 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 600.7 -1.5 -1548 3.9 CTCF ZNF687 MLLT1 RAD21 IKZF1 GLIS2 BACH1 IKZF2 ZIC2 RFX1 LOC105369945 C12orf42 GC12P103397
GH12J103440 Promoter/Enhancer 1.3 Ensembl ENCODE 0.2 -54.0 -53978 3 ZNF687 JUND RELA CREM MLLT1 RAD21 ZBED1 IKZF1 POLR2A BACH1 GC12P103397 LOC105369945 C12orf42
GH12J103454 Enhancer 0.7 Ensembl ENCODE 0.3 -40.0 -40045 4 IKZF1 RFX1 IKZF2 BMI1 RUNX3 EBF1 C12orf42 LOC105369945 GC12P103397
GH12J103470 Enhancer 0.4 Ensembl ENCODE 0.3 -24.9 -24944 1.4 LOC105369945 C12orf42 GC12P103397
GH12J103431 Enhancer 0.6 Ensembl 0.2 -63.7 -63744 1.4 CREM DPF2 RUNX3 BCLAF1 BCL11A NR2F1 JUNB IRF4 BATF ATF2 GC12P103397 LOC105369945 C12orf42
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369945 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369945 Gene

Genomic Locations for LOC105369945 Gene
chr12:103,496,045-103,497,695
(GRCh38/hg38)
Size:
1,651 bases
Orientation:
Plus strand

Genomic View for LOC105369945 Gene

Genes around LOC105369945 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369945 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369945 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369945 Gene

Proteins for LOC105369945 Gene

Post-translational modifications for LOC105369945 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369945 Gene

Domains & Families for LOC105369945 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369945 Gene

Function for LOC105369945 Gene

Phenotypes From GWAS Catalog for LOC105369945 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369945 Gene

Localization for LOC105369945 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369945 Gene

Pathways & Interactions for LOC105369945 Gene

PathCards logo

SuperPathways for LOC105369945 Gene

No Data Available

Interacting Proteins for LOC105369945 Gene

Gene Ontology (GO) - Biological Process for LOC105369945 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369945 Gene

Drugs & Compounds for LOC105369945 Gene

No Compound Related Data Available

Transcripts for LOC105369945 Gene

mRNA/cDNA for LOC105369945 Gene

(2) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369945 Gene

No ASD Table

Relevant External Links for LOC105369945 Gene

GeneLoc Exon Structure for
LOC105369945

Expression for LOC105369945 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369945 Gene

Orthologs for LOC105369945 Gene

No data available for Orthologs and Evolution for LOC105369945 Gene

Paralogs for LOC105369945 Gene

No data available for Paralogs for LOC105369945 Gene

Variants for LOC105369945 Gene

Sequence variations from dbSNP and Humsavar for LOC105369945 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000137399 -- 103,494,274(+) G/T upstream_transcript_variant
rs1000210005 -- 103,494,557(+) A/T upstream_transcript_variant
rs1000810675 -- 103,497,840(+) G/A/T downstream_transcript_variant
rs1002986516 -- 103,495,697(+) A/C upstream_transcript_variant
rs1003079898 -- 103,494,449(+) T/C upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369945 Gene

Disorders for LOC105369945 Gene

No disorders were found for LOC105369945 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369945 Gene

Publications for LOC105369945 Gene

No publications were found for LOC105369945 Gene.

No data available for External Links for LOC105369945 Gene

Products for LOC105369945 Gene

Sources for LOC105369945 Gene

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