Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369938 Gene

Subcategory (RNA class) for LOC105369938 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369938 Gene

  • Uncharacterized LOC105369938 3

External Ids for LOC105369938 Gene

Previous GeneCards Identifiers for LOC105369938 Gene

  • GC12U902451

Summaries for LOC105369938 Gene

GeneCards Summary for LOC105369938 Gene

LOC105369938 (Uncharacterized LOC105369938) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105369938 include Distal Arthrogryposis.

Additional gene information for LOC105369938 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369938 Gene

Genomics for LOC105369938 Gene

GeneHancer (GH) Regulatory Elements for LOC105369938 Gene

Promoters and enhancers for LOC105369938 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J101614 Promoter/Enhancer 1.9 FANTOM5 Ensembl ENCODE dbSUPER 600.7 +1.8 1755 6 ELF3 MNT CEBPG RERE NFIB TFE3 TRIM24 SP1 HNF1A PPARG LOC105369938 MYBPC1 CHPT1 RNU6-101P SYCP3 ENSG00000257514
GH12J101606 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 +10.4 10351 3.4 ELF3 CEBPG RERE NCOA3 ZNF24 TFE3 HNF1A PPARG SP5 ZNF384 CHPT1 MYBPC1 RNU6-101P SYCP3 ENSG00000257514 LOC105369938
GH12J101597 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 0.3 +20.5 20538 6.6 CEBPG HNF1A PPARG SP5 PRDM1 ZNF384 ZNF644 HMG20B PKNOX1 RNF2 MYBPC1 SYCP3 CHPT1 ENSG00000257514 LOC105369938
GH12J101603 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +14.5 14475 2 ZNF652 ELF3 CEBPG SP1 PPARG ZNF384 IKZF1 CEBPA GATAD2A RXRB CHPT1 ENSG00000257514 LOC105369938 MYBPC1
GH12J101591 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +26.4 26357 2.9 CEBPG ZNF384 ZNF644 CEBPA GATAD2A FOXA2 TEAD1 FOXP1 CEBPB ZNF366 SYCP3 MYBPC1 LOC105369938
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369938 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369938 Gene

Genomic Locations for LOC105369938 Gene
chr12:101,600,928-101,618,839
(GRCh38/hg38)
Size:
17,912 bases
Orientation:
Minus strand

Genomic View for LOC105369938 Gene

Genes around LOC105369938 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369938 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369938 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369938 Gene

Proteins for LOC105369938 Gene

Post-translational modifications for LOC105369938 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369938 Gene

Domains & Families for LOC105369938 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369938 Gene

Function for LOC105369938 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369938 Gene

Localization for LOC105369938 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369938 Gene

Pathways & Interactions for LOC105369938 Gene

PathCards logo

SuperPathways for LOC105369938 Gene

No Data Available

Interacting Proteins for LOC105369938 Gene

Gene Ontology (GO) - Biological Process for LOC105369938 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369938 Gene

Drugs & Compounds for LOC105369938 Gene

No Compound Related Data Available

Transcripts for LOC105369938 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369938 Gene

No ASD Table

Relevant External Links for LOC105369938 Gene

GeneLoc Exon Structure for
LOC105369938

No data available for mRNA/cDNA for LOC105369938 Gene

Expression for LOC105369938 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369938 Gene

Orthologs for LOC105369938 Gene

No data available for Orthologs and Evolution for LOC105369938 Gene

Paralogs for LOC105369938 Gene

No data available for Paralogs for LOC105369938 Gene

Variants for LOC105369938 Gene

Sequence variations from dbSNP and Humsavar for LOC105369938 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs181619118 benign, likely-benign, not specified, Distal arthrogryposis 101,614,487(-) C/T genic_upstream_transcript_variant, intron_variant
rs886048827 uncertain-significance, Distal arthrogryposis 101,614,517(-) CCCCACCCCC/CCCC genic_upstream_transcript_variant, intron_variant
rs1000047576 -- 101,609,180(-) G/A intron_variant
rs1000103246 -- 101,614,322(-) G/T genic_upstream_transcript_variant, intron_variant
rs1000182050 -- 101,603,254(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369938 Gene

Disorders for LOC105369938 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105369938 Gene - From: GeneCards

Disorder Aliases PubMed IDs
distal arthrogryposis
  • freeman-sheldon syndrome
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105369938: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369938 Gene

Publications for LOC105369938 Gene

No publications were found for LOC105369938 Gene.

No data available for External Links for LOC105369938 Gene

Products for LOC105369938 Gene

Sources for LOC105369938 Gene

Content
Loading form....