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Aliases for LOC105369933 Gene

Subcategory (RNA class) for LOC105369933 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369933 Gene

  • Uncharacterized LOC105369933 3

External Ids for LOC105369933 Gene

Previous GeneCards Identifiers for LOC105369933 Gene

  • GC12U902310

Summaries for LOC105369933 Gene

GeneCards Summary for LOC105369933 Gene

LOC105369933 (Uncharacterized LOC105369933) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369933 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369933 Gene

Genomics for LOC105369933 Gene

GeneHancer (GH) Regulatory Elements for LOC105369933 Gene

Promoters and enhancers for LOC105369933 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J098351 Enhancer 0.9 Ensembl ENCODE 0.7 -2.0 -2017 2.4 IKZF1 IKZF2 REST SP1 DPF2 ZEB1 RUNX3 FOS BMI1 JUNB SNORA53 LOC105369933 GC12P098384
GH12J098344 Enhancer 0.9 Ensembl ENCODE 0.4 +6.5 6498 2.6 CBFA2T2 TRIM24 IKZF1 IKZF2 HDAC1 SOX6 TCF12 NFE2 NR2F1 NCOR1 LOC105369933 LOC100131529
GH12J098345 Enhancer 0.7 ENCODE 0.4 +5.0 5041 0.2 CBFA2T2 TRIM24 HDAC1 SOX6 TCF12 NFE2 NCOR1 NFIC ZNF395 DPF2 LOC105369933 LOC100131529
GH12J098373 Enhancer 0.9 Ensembl ENCODE 0.3 -20.0 -20001 5.6 CTCF RAD21 ZNF143 REST TRIM22 ZNF512B GABPA MEF2D SMC3 GATA3 RNU4-41P GC12P098384 LOC105369933
GH12J098355 Enhancer 0.4 Ensembl 0.4 -5.1 -5102 0.2 FOSL2 JUND LOC105369933 GC12P098384
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369933 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369933 Gene

Genomic Locations for LOC105369933 Gene
chr12:98,337,758-98,350,599
(GRCh38/hg38)
Size:
12,842 bases
Orientation:
Minus strand

Genomic View for LOC105369933 Gene

Genes around LOC105369933 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369933 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369933 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369933 Gene

Proteins for LOC105369933 Gene

Post-translational modifications for LOC105369933 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369933 Gene

Domains & Families for LOC105369933 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369933 Gene

Function for LOC105369933 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369933 Gene

Localization for LOC105369933 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369933 Gene

Pathways & Interactions for LOC105369933 Gene

PathCards logo

SuperPathways for LOC105369933 Gene

No Data Available

Interacting Proteins for LOC105369933 Gene

Gene Ontology (GO) - Biological Process for LOC105369933 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369933 Gene

Drugs & Compounds for LOC105369933 Gene

No Compound Related Data Available

Transcripts for LOC105369933 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369933 Gene

No ASD Table

Relevant External Links for LOC105369933 Gene

GeneLoc Exon Structure for
LOC105369933

No data available for mRNA/cDNA for LOC105369933 Gene

Expression for LOC105369933 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369933 Gene

Orthologs for LOC105369933 Gene

No data available for Orthologs and Evolution for LOC105369933 Gene

Paralogs for LOC105369933 Gene

No data available for Paralogs for LOC105369933 Gene

Variants for LOC105369933 Gene

Sequence variations from dbSNP and Humsavar for LOC105369933 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000461286 -- 98,337,358(-) T/G downstream_transcript_variant
rs1000539154 -- 98,342,266(-) A/T intron_variant
rs1000591717 -- 98,342,005(-) T/C intron_variant
rs1000802861 -- 98,348,024(-) C/T intron_variant
rs1000864616 -- 98,347,867(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369933 Gene

Disorders for LOC105369933 Gene

No disorders were found for LOC105369933 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369933 Gene

Publications for LOC105369933 Gene

No publications were found for LOC105369933 Gene.

No data available for External Links for LOC105369933 Gene

Products for LOC105369933 Gene

Sources for LOC105369933 Gene

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