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Aliases for LOC105369921 Gene

Subcategory (RNA class) for LOC105369921 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369921 Gene

  • Uncharacterized LOC105369921 3

External Ids for LOC105369921 Gene

Previous GeneCards Identifiers for LOC105369921 Gene

  • GC12U902107

Summaries for LOC105369921 Gene

GeneCards Summary for LOC105369921 Gene

LOC105369921 (Uncharacterized LOC105369921) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369921 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369921 Gene

Genomics for LOC105369921 Gene

GeneHancer (GH) Regulatory Elements for LOC105369921 Gene

Promoters and enhancers for LOC105369921 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J095835 Enhancer 0.9 ENCODE 600.7 +1.5 1496 2.8 ZNF652 SP7 SP1 KLF14 PRDM1 ZNF680 POLR2A RXRA ZSCAN4 REST LOC105369921 ENSG00000258343 ELK3 NR2C1 RNU6-247P NTN4 LTA4H SNRPF CFAP54 CCDC38
GH12J095839 Enhancer 0.2 Ensembl 600.7 -0.9 -933 0.4 LOC105369921 NTN4 RNU6-247P GC12M095850 ENSG00000258343 GC12P095807
GH12J095788 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.3 +48.8 48778 4.2 CEBPG ZSCAN21 YY1 PRDM1 MZF1 ZNF547 FOSL2 GLIS2 HMG20B ZBTB8A NTN4 SNRPF ENSG00000258343 GC12M095785 LOC105369921
GH12J095801 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.3 +30.9 30938 11.7 CEBPG RERE NCOA3 MAFK ELF1 SP1 HNF1A PPARG ZNF644 MZF1 GC12P095807 ENSG00000258343 SNRPF NR2C1 USP44 CCDC38 ENSG00000257878 LINC02410 GC12M095799 LOC105369921
GH12J095829 Enhancer 0.7 ENCODE 0.4 +9.0 9000 0 SP1 RXRA CEBPA FOXA2 JUND ATF3 YY1 ZBTB33 RAD21 HNF4A SNRPF LOC105369921 GC12P095807 ENSG00000258343
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369921 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369921 Gene

Genomic Locations for LOC105369921 Gene
chr12:95,791,782-95,838,668
(GRCh38/hg38)
Size:
46,887 bases
Orientation:
Minus strand

Genomic View for LOC105369921 Gene

Genes around LOC105369921 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369921 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369921 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369921 Gene

Proteins for LOC105369921 Gene

Post-translational modifications for LOC105369921 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369921 Gene

Domains & Families for LOC105369921 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369921 Gene

Function for LOC105369921 Gene

Phenotypes From GWAS Catalog for LOC105369921 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369921 Gene

Localization for LOC105369921 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369921 Gene

Pathways & Interactions for LOC105369921 Gene

PathCards logo

SuperPathways for LOC105369921 Gene

No Data Available

Interacting Proteins for LOC105369921 Gene

Gene Ontology (GO) - Biological Process for LOC105369921 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369921 Gene

Drugs & Compounds for LOC105369921 Gene

No Compound Related Data Available

Transcripts for LOC105369921 Gene

mRNA/cDNA for LOC105369921 Gene

(4) Additional mRNA sequences :
(2) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369921 Gene

No ASD Table

Relevant External Links for LOC105369921 Gene

GeneLoc Exon Structure for
LOC105369921

Expression for LOC105369921 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369921 Gene

Orthologs for LOC105369921 Gene

No data available for Orthologs and Evolution for LOC105369921 Gene

Paralogs for LOC105369921 Gene

No data available for Paralogs for LOC105369921 Gene

Variants for LOC105369921 Gene

Sequence variations from dbSNP and Humsavar for LOC105369921 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000005097 -- 95,830,615(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000147667 -- 95,838,220(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000226876 -- 95,819,552(-) C/T genic_downstream_transcript_variant, intron_variant
rs1000237500 -- 95,811,118(-) G/A genic_downstream_transcript_variant, intron_variant
rs1000265940 -- 95,858,421(-) T/C intron_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369921 Gene

Disorders for LOC105369921 Gene

No disorders were found for LOC105369921 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369921 Gene

Publications for LOC105369921 Gene

No publications were found for LOC105369921 Gene.

No data available for External Links for LOC105369921 Gene

Products for LOC105369921 Gene

Sources for LOC105369921 Gene

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