Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369905 Gene

Subcategory (RNA class) for LOC105369905 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369905 Gene

  • Uncharacterized LOC105369905 3

External Ids for LOC105369905 Gene

Previous GeneCards Identifiers for LOC105369905 Gene

  • GC12U902365

Summaries for LOC105369905 Gene

GeneCards Summary for LOC105369905 Gene

LOC105369905 (Uncharacterized LOC105369905) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369905 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369905 Gene

Genomics for LOC105369905 Gene

GeneHancer (GH) Regulatory Elements for LOC105369905 Gene

Promoters and enhancers for LOC105369905 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J092549 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.7 -2.4 -2413 10.5 SP1 ELF3 NKRF ZNF687 MAFK JUND RELA CREM MLLT1 ZBED1 BTG1 ENSG00000245904 EEA1 LOC105369905 LOC100132126
GH12J092561 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.7 +4.5 4470 1.3 NKRF ZNF687 SP1 MLLT1 RXRA ZNF143 IKZF2 FOXA2 CEBPB DPF2 BTG1 ENSG00000245904 LOC105369905 C12orf74 PLEKHG7
GH12J092537 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -14.9 -14867 13.2 SP1 ZNF148 NKRF ZNF687 JUND TRIM24 RELA CREM MLLT1 EGR1 LINC02397 CLLU1OS BTG1 CLLU1 EEA1 LOC100132126 LOC105369905
GH12J092568 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +12.5 12548 2.2 CC2D1A CTCF ZNF687 RELA SP1 MLLT1 RAD21 IKZF1 RXRA ARID2 BTG1 CLLU1OS EEA1 LOC105369905 PLEKHG7 C12orf74
GH12J092572 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +16.9 16928 4 CTCF SP1 RAD21 RXRA CEBPA FOXA2 JUND YY1 ZBTB33 ZNF217 LOC105369905 PLEKHG7 C12orf74
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369905 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369905 Gene

Genomic Locations for LOC105369905 Gene
chr12:92,557,249-92,629,891
(GRCh38/hg38)
Size:
72,643 bases
Orientation:
Plus strand

Genomic View for LOC105369905 Gene

Genes around LOC105369905 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369905 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369905 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369905 Gene

Proteins for LOC105369905 Gene

Post-translational modifications for LOC105369905 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369905 Gene

Domains & Families for LOC105369905 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369905 Gene

Function for LOC105369905 Gene

Phenotypes From GWAS Catalog for LOC105369905 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369905 Gene

Localization for LOC105369905 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369905 Gene

Pathways & Interactions for LOC105369905 Gene

PathCards logo

SuperPathways for LOC105369905 Gene

No Data Available

Interacting Proteins for LOC105369905 Gene

Gene Ontology (GO) - Biological Process for LOC105369905 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369905 Gene

Drugs & Compounds for LOC105369905 Gene

No Compound Related Data Available

Transcripts for LOC105369905 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369905 Gene

No ASD Table

Relevant External Links for LOC105369905 Gene

GeneLoc Exon Structure for
LOC105369905

No data available for mRNA/cDNA for LOC105369905 Gene

Expression for LOC105369905 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369905 Gene

Orthologs for LOC105369905 Gene

No data available for Orthologs and Evolution for LOC105369905 Gene

Paralogs for LOC105369905 Gene

No data available for Paralogs for LOC105369905 Gene

Variants for LOC105369905 Gene

Sequence variations from dbSNP and Humsavar for LOC105369905 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000052103 -- 92,610,946(+) A/C genic_downstream_transcript_variant, intron_variant
rs1000054397 -- 92,583,326(+) T/G intron_variant, non_coding_transcript_variant
rs1000110674 -- 92,623,805(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000111031 -- 92,563,441(+) A/C intron_variant
rs1000157003 -- 92,560,304(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369905 Gene

Disorders for LOC105369905 Gene

No disorders were found for LOC105369905 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369905 Gene

Publications for LOC105369905 Gene

No publications were found for LOC105369905 Gene.

No data available for External Links for LOC105369905 Gene

Products for LOC105369905 Gene

Sources for LOC105369905 Gene

Content
Loading form....