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Aliases for LOC105369850 Gene

Subcategory (RNA class) for LOC105369850 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369850 Gene

  • Uncharacterized LOC105369850 3

External Ids for LOC105369850 Gene

Previous GeneCards Identifiers for LOC105369850 Gene

  • GC12U902428

Summaries for LOC105369850 Gene

GeneCards Summary for LOC105369850 Gene

LOC105369850 (Uncharacterized LOC105369850) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369850 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369850 Gene

Genomics for LOC105369850 Gene

GeneHancer (GH) Regulatory Elements for LOC105369850 Gene

Promoters and enhancers for LOC105369850 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J076556 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE 600.7 -1.3 -1258 4.8 SP1 ZFX ELF3 CBFA2T2 ZNF148 NKRF POLR2A MLLT1 RERE GTF2F1 OSBPL8 ZDHHC17 LOC105369850 GC12P076557 BBS10
GH12J076562 Promoter 0.7 Ensembl 0.7 +2.7 2659 0.2 PRDM1 CEBPG CEBPB ENSG00000257526 BBS10 LOC105369850 GC12P076571
GH12J076586 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 +29.3 29259 6.6 CTCF RAD21 REST ATF7 TRIM22 GATAD2B SMC3 GATA3 CEBPG CEBPB BBS10 OSBPL8 GC12P076586 RPL7AP9 LOC105369850 ENSG00000257526
GH12J076569 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.4 +10.1 10059 1 SP1 RFX1 GC12P076571 OSBPL8 ZDHHC17 ENSG00000257526 LOC105369850
GH12J076611 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 +51.5 51459 3 BACH1 FOSL2 CREB1 PRDM12 CTBP1 ZNF316 CEBPB CHD2 JUN NFE2 ZDHHC17 OSBPL8 YWHAQP7 GC12P076601 ENSG00000257526 LOC105369850
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369850 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369850 Gene

Genomic Locations for LOC105369850 Gene
chr12:76,559,842-76,615,406
(GRCh38/hg38)
Size:
55,565 bases
Orientation:
Plus strand

Genomic View for LOC105369850 Gene

Genes around LOC105369850 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369850 Gene

Proteins for LOC105369850 Gene

Post-translational modifications for LOC105369850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369850 Gene

Domains & Families for LOC105369850 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369850 Gene

Function for LOC105369850 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369850 Gene

Localization for LOC105369850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369850 Gene

Pathways & Interactions for LOC105369850 Gene

PathCards logo

SuperPathways for LOC105369850 Gene

No Data Available

Interacting Proteins for LOC105369850 Gene

Gene Ontology (GO) - Biological Process for LOC105369850 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369850 Gene

Drugs & Compounds for LOC105369850 Gene

No Compound Related Data Available

Transcripts for LOC105369850 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369850 Gene

No ASD Table

Relevant External Links for LOC105369850 Gene

GeneLoc Exon Structure for
LOC105369850

No data available for mRNA/cDNA for LOC105369850 Gene

Expression for LOC105369850 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369850 Gene

Orthologs for LOC105369850 Gene

No data available for Orthologs and Evolution for LOC105369850 Gene

Paralogs for LOC105369850 Gene

No data available for Paralogs for LOC105369850 Gene

Variants for LOC105369850 Gene

Sequence variations from dbSNP and Humsavar for LOC105369850 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000064522 -- 76,601,435(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000089369 -- 76,582,257(+) C/A intron_variant
rs1000118862 -- 76,589,941(+) C/T intron_variant
rs1000144222 -- 76,575,059(+) A/G intron_variant
rs1000215221 -- 76,576,704(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369850 Gene

Disorders for LOC105369850 Gene

No disorders were found for LOC105369850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369850 Gene

Publications for LOC105369850 Gene

No publications were found for LOC105369850 Gene.

No data available for External Links for LOC105369850 Gene

Products for LOC105369850 Gene

Sources for LOC105369850 Gene

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