Aliases for LOC105369828 Gene

Subcategory (RNA class) for LOC105369828 Gene

ncRNA

Aliases for LOC105369828 Gene

  • Uncharacterized LOC105369828 3

External Ids for LOC105369828 Gene

Previous GeneCards Identifiers for LOC105369828 Gene

  • GC12U902165

Summaries for LOC105369828 Gene

GeneCards Summary for LOC105369828 Gene

LOC105369828 (Uncharacterized LOC105369828) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369828 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369828 Gene

Genomics for LOC105369828 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105369828 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J070543 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +17.2 17236 1.4 CEBPB SMARCC1 JUND FOS CHD2 JUN RCOR1 GTF2F1 FOSL1 MAX KCNMB4 lnc-PTPRR-1 LOC105369828 ENSG00000258168 PTPRB
GH12J070536 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +9.7 9736 1.6 SP1 SOX13 FOXA2 NR2F2 SOX5 BHLHE40 KCNMB4 ENSG00000258168 LOC105369828 lnc-PTPRR-1 PTPRB
GH12J070548 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +22.9 22866 1.7 JUND CEBPA SOX13 FOXA2 FOSL1 FOXP1 FOSL2 JUN EGR2 FOXA3 lnc-PTPRR-1 NONHSAG011665.2 LOC105369828 ENSG00000258168 PTPRB KCNMB4
GH12J070506 Enhancer 0.7 Ensembl 0.4 -18.9 -18864 1.6 JUND HDAC1 SOX6 NFE2 ZNF316 MAFF MAFK FOSL1 MAFG NR2F1 piR-33998-003 LOC105369828 ENSG00000258168 LOC105369827 PTPRB KCNMB4
GH12J070560 Enhancer 0.6 ENCODE dbSUPER 0.3 +34.3 34332 1 FOS JUND ZMYM3 NONHSAG011665.2 KCNMB4 lnc-PTPRR-1 LOC105369828 PTPRB ENSG00000258168
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369828 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369828 Gene

Genomic Locations for LOC105369828 Gene
chr12:70,526,465-70,571,817
(GRCh38/hg38)
Size:
45,353 bases
Orientation:
Plus strand

Genomic View for LOC105369828 Gene

Genes around LOC105369828 on UCSC Golden Path with GeneCards custom track
LOC105369828 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105369828 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369828 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369828 Gene

Proteins for LOC105369828 Gene

Post-translational modifications for LOC105369828 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369828 Gene

Domains & Families for LOC105369828 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369828 Gene

Function for LOC105369828 Gene

Phenotypes From GWAS Catalog for LOC105369828 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369828 Gene

Localization for LOC105369828 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369828 Gene

Pathways & Interactions for LOC105369828 Gene

PathCards logo

SuperPathways for LOC105369828 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369828 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369828 Gene

Drugs & Compounds for LOC105369828 Gene

No Compound Related Data Available

Transcripts for LOC105369828 Gene

LOC105369828 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369828 Gene

No ASD Table

Relevant External Links for LOC105369828 Gene

GeneLoc Exon Structure for
LOC105369828

No data available for mRNA/cDNA for LOC105369828 Gene

Expression for LOC105369828 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369828 Gene

Orthologs for LOC105369828 Gene

No data available for Orthologs and Evolution for LOC105369828 Gene

Paralogs for LOC105369828 Gene

No data available for Paralogs for LOC105369828 Gene

Variants for LOC105369828 Gene

Additional dbSNP identifiers (rs#s) for LOC105369828 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369828 Gene

Disorders for LOC105369828 Gene

No disorders were found for LOC105369828 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369828 Gene

Publications for LOC105369828 Gene

No publications were found for LOC105369828 Gene.

No data available for Mastermind for LOC105369828 Gene

Products for LOC105369828 Gene

Sources for LOC105369828 Gene