Aliases for LOC105369820 Gene

Subcategory (RNA class) for LOC105369820 Gene

ncRNA

Aliases for LOC105369820 Gene

  • Uncharacterized LOC105369820 3

External Ids for LOC105369820 Gene

Previous GeneCards Identifiers for LOC105369820 Gene

  • GC12U902009

Summaries for LOC105369820 Gene

GeneCards Summary for LOC105369820 Gene

LOC105369820 (Uncharacterized LOC105369820) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369820 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369820 Gene

Genomics for LOC105369820 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105369820 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J068780 Enhancer 0.2 ENCODE 600.7 -0.7 -742 0.2 LOC105369820 SLC35E3 ENSG00000256678 MDM2 ENSG00000247363 NUP107 RPL7P42 LINC02384 MDM1 LOC100422438
GH12J068785 Enhancer 1.2 FANTOM5 ENCODE 0.4 +5.5 5484 3.7 GATAD2A CTCF ATF7 PRDM10 REST TFE3 SOX13 IKZF1 PRDM1 RELA MDM2 RAP1B CPM SLC35E3 ENSG00000256678 MN309483 piR-48759-060 LOC105369820 lnc-NUP107-26
GH12J068789 Enhancer 0.8 ENCODE 0.4 +7.5 7538 0.2 GATAD2A REST TFE3 RCOR2 RBFOX2 RXRB SP1 CEBPA FOXK2 SOX13 MN309483 piR-48759-060 LOC105369820 MDM2 SLC35E3 lnc-NUP107-26
GH12J068783 Enhancer 0.5 ENCODE 0.7 +2.6 2583 0.8 CEBPA MBD1 CEBPB SMAD4 BCL6 POLR2A RAD21 MYC CEBPG piR-48759-060 ENSG00000256678 SLC35E3 MDM2 LOC105369820 lnc-NUP107-26
GH12J068793 Enhancer 0.7 Ensembl ENCODE 0.4 +11.7 11684 0.8 SP1 MBD2 NFYA NFYB RFX5 PRDM10 FOS MNT NFYC CTCF MDM2 MN309483 LOC105369820 ENSG00000256678 SLC35E3 lnc-NUP107-26
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369820 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369820 Gene

Genomic Locations for LOC105369820 Gene
chr12:68,781,698-68,793,968
(GRCh38/hg38)
Size:
12,271 bases
Orientation:
Plus strand

Genomic View for LOC105369820 Gene

Genes around LOC105369820 on UCSC Golden Path with GeneCards custom track
LOC105369820 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105369820 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369820 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369820 Gene

Proteins for LOC105369820 Gene

Post-translational modifications for LOC105369820 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369820 Gene

Domains & Families for LOC105369820 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369820 Gene

Function for LOC105369820 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369820 Gene

Localization for LOC105369820 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369820 Gene

Pathways & Interactions for LOC105369820 Gene

PathCards logo

SuperPathways for LOC105369820 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369820 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369820 Gene

Drugs & Compounds for LOC105369820 Gene

No Compound Related Data Available

Transcripts for LOC105369820 Gene

LOC105369820 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369820 Gene

No ASD Table

Relevant External Links for LOC105369820 Gene

GeneLoc Exon Structure for
LOC105369820

No data available for mRNA/cDNA for LOC105369820 Gene

Expression for LOC105369820 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369820 Gene

Orthologs for LOC105369820 Gene

No data available for Orthologs and Evolution for LOC105369820 Gene

Paralogs for LOC105369820 Gene

No data available for Paralogs for LOC105369820 Gene

Variants for LOC105369820 Gene

Additional dbSNP identifiers (rs#s) for LOC105369820 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369820 Gene

Disorders for LOC105369820 Gene

No disorders were found for LOC105369820 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369820 Gene

Publications for LOC105369820 Gene

No publications were found for LOC105369820 Gene.

No data available for Mastermind for LOC105369820 Gene

Products for LOC105369820 Gene

Sources for LOC105369820 Gene