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Aliases for LOC105369818 Gene

Subcategory (RNA class) for LOC105369818 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369818 Gene

  • Uncharacterized LOC105369818 3

External Ids for LOC105369818 Gene

Previous GeneCards Identifiers for LOC105369818 Gene

  • GC12U902458

Summaries for LOC105369818 Gene

GeneCards Summary for LOC105369818 Gene

LOC105369818 (Uncharacterized LOC105369818) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369818 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369818 Gene

Genomics for LOC105369818 Gene

GeneHancer (GH) Regulatory Elements for LOC105369818 Gene

Promoters and enhancers for LOC105369818 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J068198 Enhancer 0.4 Ensembl 600.7 +0.8 836 1.4 GATA3 CEBPG LOC105369818 IFNG IL26 GC12P068213 IFNG-AS1
GH12J068202 Enhancer 0.6 Ensembl 0.7 +4.9 4936 1.2 PRDM1 ZNF488 TCF7L2 SCRT2 ZXDB OSR2 MYNN OVOL3 HIC1 FEZF1 LINC02421 LOC105369818 GC12P068213 IL26 IFNG-AS1
GH12J068209 Enhancer 0.8 Ensembl 0.4 +11.1 11136 0.4 CBFA2T2 YY1 SMARCA4 PKNOX1 DPF2 IKZF1 ZBTB8A ATF1 LEF1 HDAC1 GC12P068213 LOC105369818 IL26 IFNG-AS1
GH12J068200 Enhancer 0.5 Ensembl 0.7 +2.4 2436 1.4 CAVIN1 SOX6 CEBPG IKZF1 IFNG IL26 LOC105369818 GC12P068213 IFNG-AS1
GH12J068223 Enhancer 0.9 ENCODE 0.3 +24.8 24841 0.2 ELF3 CC2D1A CTCF TRIM24 KLF14 SP5 RAD21 CREB1 ZBTB33 PKNOX1 IL22 MDM1 LINC02384 LINC02421 IL26 GC12P068213 LOC105369818 IFNG-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369818 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369818 Gene

Genomic Locations for LOC105369818 Gene
chr12:68,198,465-68,313,102
(GRCh38/hg38)
Size:
114,638 bases
Orientation:
Plus strand

Genomic View for LOC105369818 Gene

Genes around LOC105369818 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369818 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369818 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369818 Gene

Proteins for LOC105369818 Gene

Post-translational modifications for LOC105369818 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369818 Gene

Domains & Families for LOC105369818 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369818 Gene

Function for LOC105369818 Gene

Phenotypes From GWAS Catalog for LOC105369818 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369818 Gene

Localization for LOC105369818 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369818 Gene

Pathways & Interactions for LOC105369818 Gene

PathCards logo

SuperPathways for LOC105369818 Gene

No Data Available

Interacting Proteins for LOC105369818 Gene

Gene Ontology (GO) - Biological Process for LOC105369818 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369818 Gene

Drugs & Compounds for LOC105369818 Gene

No Compound Related Data Available

Transcripts for LOC105369818 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369818 Gene

No ASD Table

Relevant External Links for LOC105369818 Gene

GeneLoc Exon Structure for
LOC105369818

No data available for mRNA/cDNA for LOC105369818 Gene

Expression for LOC105369818 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369818 Gene

Orthologs for LOC105369818 Gene

No data available for Orthologs and Evolution for LOC105369818 Gene

Paralogs for LOC105369818 Gene

No data available for Paralogs for LOC105369818 Gene

Variants for LOC105369818 Gene

Sequence variations from dbSNP and Humsavar for LOC105369818 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000007312 -- 68,225,249(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000044607 -- 68,303,994(+) T/A genic_downstream_transcript_variant, intron_variant
rs1000064797 -- 68,269,149(+) G/T genic_downstream_transcript_variant, intron_variant
rs1000072076 -- 68,311,142(+) C/T genic_downstream_transcript_variant, intron_variant
rs1000102819 -- 68,277,265(+) A/G genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369818 Gene

Disorders for LOC105369818 Gene

No disorders were found for LOC105369818 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369818 Gene

Publications for LOC105369818 Gene

No publications were found for LOC105369818 Gene.

No data available for External Links for LOC105369818 Gene

Products for LOC105369818 Gene

Sources for LOC105369818 Gene

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