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Aliases for LOC105369808 Gene

Subcategory (RNA class) for LOC105369808 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105369808 Gene

  • Uncharacterized LOC105369808 3
  • AC090023.1 5

External Ids for LOC105369808 Gene

Previous GeneCards Identifiers for LOC105369808 Gene

  • GC12U902115

Summaries for LOC105369808 Gene

GeneCards Summary for LOC105369808 Gene

LOC105369808 (Uncharacterized LOC105369808) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369808 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369808 Gene

Genomics for LOC105369808 Gene

GeneHancer (GH) Regulatory Elements for LOC105369808 Gene

Promoters and enhancers for LOC105369808 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I065555 Enhancer 1.2 Ensembl ENCODE dbSUPER 550.8 +0.0 25 2.1 RB1 ZNF2 ZNF48 ZSCAN9 RAD21 RFX5 YY1 ZNF335 ZNF416 ZNF143 LOC105369808 LEMD3 LINC02454 LOC100507065 LOC105369187
GH12I065563 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 +8.9 8942 4.5 HDAC1 ATF1 ARNT ZNF335 FOS PHF21A USF2 SMARCA4 IKZF1 HMBOX1 LINC02454 LOC105369808 LOC100507065 LOC105369187
GH12I065531 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -21.8 -21802 7.8 PKNOX1 ARNT ZNF529 MZF1 FEZF1 RAD21 RFX5 ZNF335 ZNF121 ELK1 HMGA2 LOC105369808 GC12M065495 LOC100507065 LOC105369187
GH12I065561 Enhancer 0.9 ENCODE dbSUPER 0.4 +5.4 5353 2.1 JUN BACH1 PYGO2 ZBTB40 ZNF766 DIDO1 ZNF639 ZNF740 NR4A1 GTF2A2 LEMD3 LINC02454 LOC105369808 LOC100507065 LOC105369187
GH12I065568 Enhancer 0.6 ENCODE dbSUPER 0.4 +11.7 11719 0.2 USF2 ZBTB12 LINC02454 LOC105369808 LOC100507065 LOC105369187
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105369808 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369808 Gene

Genomic Locations for LOC105369808 Gene
chr12:65,556,993-65,560,889
(GRCh38/hg38)
Size:
3,897 bases
Orientation:
Plus strand
chr12:65,953,371-65,954,669
(GRCh37/hg19)

Genomic View for LOC105369808 Gene

Genes around LOC105369808 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369808 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369808 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369808 Gene

Proteins for LOC105369808 Gene

Post-translational modifications for LOC105369808 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369808 Gene

Domains & Families for LOC105369808 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369808 Gene

Function for LOC105369808 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369808 Gene

Localization for LOC105369808 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369808 Gene

Pathways & Interactions for LOC105369808 Gene

SuperPathways for LOC105369808 Gene

No Data Available

Interacting Proteins for LOC105369808 Gene

Gene Ontology (GO) - Biological Process for LOC105369808 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369808 Gene

Drugs & Compounds for LOC105369808 Gene

No Compound Related Data Available

Transcripts for LOC105369808 Gene

mRNA/cDNA for LOC105369808 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369808 Gene

No ASD Table

Relevant External Links for LOC105369808 Gene

GeneLoc Exon Structure for
LOC105369808

Expression for LOC105369808 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369808 Gene

Orthologs for LOC105369808 Gene

Evolution for LOC105369808 Gene

ENSEMBL:
Gene Tree for LOC105369808 (if available)
TreeFam:
Gene Tree for LOC105369808 (if available)

No data available for Orthologs for LOC105369808 Gene

Paralogs for LOC105369808 Gene

No data available for Paralogs for LOC105369808 Gene

Variants for LOC105369808 Gene

Sequence variations from dbSNP and Humsavar for LOC105369808 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1001004625 -- 65,558,485(+) C/A non_coding_transcript_variant
rs1001099061 -- 65,558,787(+) C/A intron_variant
rs1001275551 -- 65,559,369(+) A/G intron_variant
rs1001580770 -- 65,558,922(+) G/A intron_variant
rs1001618758 -- 65,557,466(+) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369808 Gene

Disorders for LOC105369808 Gene

No disorders were found for LOC105369808 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369808 Gene

Publications for LOC105369808 Gene

No publications were found for LOC105369808 Gene.

Products for LOC105369808 Gene

Sources for LOC105369808 Gene

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