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Aliases for LOC105369806 Gene

Subcategory (RNA class) for LOC105369806 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369806 Gene

  • Uncharacterized LOC105369806 3

External Ids for LOC105369806 Gene

Previous GeneCards Identifiers for LOC105369806 Gene

  • GC12U902236

Summaries for LOC105369806 Gene

GeneCards Summary for LOC105369806 Gene

LOC105369806 (Uncharacterized LOC105369806) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369806 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369806 Gene

Genomics for LOC105369806 Gene

GeneHancer (GH) Regulatory Elements for LOC105369806 Gene

Promoters and enhancers for LOC105369806 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J065601 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.1 -18102 5.3 CTCF ZNF148 ZNF384 ELF1 SP7 PRDM1 MZF1 EGR1 RAD21 PKNOX1 LEMD3 LINC02454 HMGA2 LOC105369806 LOC100507065
GH12J065607 Promoter/Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.0 -12023 6.4 CTCF MZF1 ZNF680 CREB1 POLR2A CTBP1 RAD21 ZNF217 SMC3 DPF2 LINC02454 LOC105369806 LOC100507065
GH12J065629 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.1 15091 16.8 ELF3 ZKSCAN8 CBFA2T2 MLLT1 GTF2F1 ZNF384 ZSCAN21 NFRKB ZNF24 MAFK LEMD3 HMGA2 RPSAP52 LINC02454 LOC100507065 PCNPP3 ENSG00000256915 LOC105369806
GH12J065613 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -7.5 -7454 2.7 CEBPG TFE3 PRDM1 ZNF644 MTA1 ZNF512 CEBPA GATAD2A MTA2 MNT RBMS1P1 LINC02454 LOC105369806 LOC100507065
GH12J065618 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 -2.6 -2564 1.7 POLR2A LOC105369806 LOC100507065 LINC02454
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369806 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369806 Gene

Genomic Locations for LOC105369806 Gene
chr12:65,622,310-65,629,787
(GRCh38/hg38)
Size:
7,478 bases
Orientation:
Plus strand

Genomic View for LOC105369806 Gene

Genes around LOC105369806 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369806 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369806 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369806 Gene

Proteins for LOC105369806 Gene

Post-translational modifications for LOC105369806 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369806 Gene

Domains & Families for LOC105369806 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369806 Gene

Function for LOC105369806 Gene

Phenotypes From GWAS Catalog for LOC105369806 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369806 Gene

Localization for LOC105369806 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369806 Gene

Pathways & Interactions for LOC105369806 Gene

PathCards logo

SuperPathways for LOC105369806 Gene

No Data Available

Interacting Proteins for LOC105369806 Gene

Gene Ontology (GO) - Biological Process for LOC105369806 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369806 Gene

Drugs & Compounds for LOC105369806 Gene

No Compound Related Data Available

Transcripts for LOC105369806 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369806 Gene

No ASD Table

Relevant External Links for LOC105369806 Gene

GeneLoc Exon Structure for
LOC105369806

No data available for mRNA/cDNA for LOC105369806 Gene

Expression for LOC105369806 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369806 Gene

Orthologs for LOC105369806 Gene

No data available for Orthologs and Evolution for LOC105369806 Gene

Paralogs for LOC105369806 Gene

No data available for Paralogs for LOC105369806 Gene

Variants for LOC105369806 Gene

Sequence variations from dbSNP and Humsavar for LOC105369806 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000270328 -- 65,620,536(+) T/C upstream_transcript_variant
rs1000500121 -- 65,624,697(+) G/A intron_variant
rs1001115064 -- 65,624,743(+) T/A intron_variant
rs1001164399 -- 65,629,873(+) A/C downstream_transcript_variant
rs1001697579 -- 65,626,376(+) A/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369806 Gene

Disorders for LOC105369806 Gene

No disorders were found for LOC105369806 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369806 Gene

Publications for LOC105369806 Gene

No publications were found for LOC105369806 Gene.

No data available for External Links for LOC105369806 Gene

Products for LOC105369806 Gene

Sources for LOC105369806 Gene

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