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Aliases for LOC105369798 Gene

Subcategory (RNA class) for LOC105369798 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369798 Gene

  • Uncharacterized LOC105369798 3

External Ids for LOC105369798 Gene

Previous GeneCards Identifiers for LOC105369798 Gene

  • GC12U902298

Summaries for LOC105369798 Gene

GeneCards Summary for LOC105369798 Gene

LOC105369798 (Uncharacterized LOC105369798) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369798 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369798 Gene

Genomics for LOC105369798 Gene

GeneHancer (GH) Regulatory Elements for LOC105369798 Gene

Promoters and enhancers for LOC105369798 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J064130 Enhancer 0.4 FANTOM5 600.7 -0.3 -329 0.1 CREB1 LOC105369798 DPY19L2 C12orf56 GC12P064147 SRGAP1
GH12J064131 Enhancer 0.2 Ensembl 600.7 -1.3 -1334 0.4 LOC105369798 GC12P064147 SRGAP1
GH12J064097 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 +31.1 31066 6 POLR2A FOS ZFHX2 FOSL2 JUND GABPA ZBTB40 EGR2 ENSG00000255886 ENSG00000255629 RNU6-1009P SRGAP1 TBK1 ENSG00000255817 LOC105369798
GH12J064120 Enhancer 0.4 Ensembl 0.4 +9.6 9566 0.6 FOSL2 FOS ZBTB12 ENSG00000255817 ENSG00000255629 ENSG00000255886 RNU6-1009P GC12M064120 LOC105369798 SRGAP1
GH12J064137 Enhancer 0.4 ENCODE 0.4 -6.9 -6929 0.2 ATF2 MNT LOC105369798 GC12P064147 SRGAP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369798 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369798 Gene

Genomic Locations for LOC105369798 Gene
chr12:64,099,420-64,130,267
(GRCh38/hg38)
Size:
30,848 bases
Orientation:
Minus strand

Genomic View for LOC105369798 Gene

Genes around LOC105369798 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369798 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369798 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369798 Gene

Proteins for LOC105369798 Gene

Post-translational modifications for LOC105369798 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369798 Gene

Domains & Families for LOC105369798 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369798 Gene

Function for LOC105369798 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369798 Gene

Localization for LOC105369798 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369798 Gene

Pathways & Interactions for LOC105369798 Gene

PathCards logo

SuperPathways for LOC105369798 Gene

No Data Available

Interacting Proteins for LOC105369798 Gene

Gene Ontology (GO) - Biological Process for LOC105369798 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369798 Gene

Drugs & Compounds for LOC105369798 Gene

No Compound Related Data Available

Transcripts for LOC105369798 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369798 Gene

No ASD Table

Relevant External Links for LOC105369798 Gene

GeneLoc Exon Structure for
LOC105369798

No data available for mRNA/cDNA for LOC105369798 Gene

Expression for LOC105369798 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369798 Gene

Orthologs for LOC105369798 Gene

No data available for Orthologs and Evolution for LOC105369798 Gene

Paralogs for LOC105369798 Gene

No data available for Paralogs for LOC105369798 Gene

Variants for LOC105369798 Gene

Sequence variations from dbSNP and Humsavar for LOC105369798 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs114817817 risk-factor, Follicular thyroid carcinoma 64,108,967(-) C/T intron_variant
rs1000187379 -- 64,125,766(-) C/G intron_variant
rs1000349203 -- 64,118,677(-) A/T intron_variant
rs1000371869 -- 64,118,417(-) A/G intron_variant
rs1000752491 -- 64,127,800(-) T/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369798 Gene

Disorders for LOC105369798 Gene

No disorders were found for LOC105369798 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369798 Gene

Publications for LOC105369798 Gene

No publications were found for LOC105369798 Gene.

No data available for External Links for LOC105369798 Gene

Products for LOC105369798 Gene

Sources for LOC105369798 Gene

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