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Aliases for LOC105369781 Gene

Subcategory (RNA class) for LOC105369781 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369781 Gene

  • Uncharacterized LOC105369781 3

External Ids for LOC105369781 Gene

Previous GeneCards Identifiers for LOC105369781 Gene

  • GC12U902193

Summaries for LOC105369781 Gene

GeneCards Summary for LOC105369781 Gene

LOC105369781 (Uncharacterized LOC105369781) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369781 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369781 Gene

Genomics for LOC105369781 Gene

GeneHancer (GH) Regulatory Elements for LOC105369781 Gene

Promoters and enhancers for LOC105369781 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J056012 Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 0.0 -7 3.7 ELF3 CEBPG ZSCAN21 TFE3 SP1 PPARG SP5 ZNF384 ZNF644 KAT8 LOC105369781 RAB5B PMEL IKZF4 RPS26
GH12J056016 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 -5.6 -5633 6.8 SP1 ZFX ZNF148 MLLT1 GTF2F1 BACH1 PRDM1 ZNF639 EGR1 GMEB1 IKZF4 RAB5B PMEL RPS26 LOC105369781 LOC105369780
GH12J056009 Enhancer 1.1 ENCODE dbSUPER 0.7 +4.0 3994 3.2 ELF3 CBFA2T2 CEBPG TRIM24 HNF1A PPARG SP5 ZNF639 SMARCA4 MTA1 ENSG00000273890 RAB5B PMEL RPS26 CDK2 PA2G4 SARNP ORMDL2 LOC105369781 IKZF4
GH12J056028 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -13.9 -13850 3.6 CTCF ZNF121 RAD21 RXRA REST TRIM22 CTBP1 IRF2 MBD1 PKNOX1 RAB5B PMEL IKZF4 SUOX CDK2 PA2G4 RPS26 ORMDL2 SARNP LOC105369780
GH12J056034 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -22.0 -21950 4.2 PRDM1 RXRA PRDM10 ZNF341 NR2C1 NR2C2 ZNF366 PRDM6 NR2F6 HNF4A PMEL IKZF4 SUOX RAB5B CDK2 PA2G4 RPS26 ENSG00000257449 LOC105369780 LOC105369781
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369781 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369781 Gene

Genomic Locations for LOC105369781 Gene
chr12:56,010,092-56,014,750
(GRCh38/hg38)
Size:
4,659 bases
Orientation:
Minus strand

Genomic View for LOC105369781 Gene

Genes around LOC105369781 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369781 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369781 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369781 Gene

Proteins for LOC105369781 Gene

Post-translational modifications for LOC105369781 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369781 Gene

Domains & Families for LOC105369781 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369781 Gene

Function for LOC105369781 Gene

Phenotypes From GWAS Catalog for LOC105369781 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369781 Gene

Localization for LOC105369781 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369781 Gene

Pathways & Interactions for LOC105369781 Gene

PathCards logo

SuperPathways for LOC105369781 Gene

No Data Available

Interacting Proteins for LOC105369781 Gene

Gene Ontology (GO) - Biological Process for LOC105369781 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369781 Gene

Drugs & Compounds for LOC105369781 Gene

No Compound Related Data Available

Transcripts for LOC105369781 Gene

mRNA/cDNA for LOC105369781 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369781 Gene

No ASD Table

Relevant External Links for LOC105369781 Gene

GeneLoc Exon Structure for
LOC105369781

Expression for LOC105369781 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369781 Gene

Orthologs for LOC105369781 Gene

No data available for Orthologs and Evolution for LOC105369781 Gene

Paralogs for LOC105369781 Gene

No data available for Paralogs for LOC105369781 Gene

Variants for LOC105369781 Gene

Sequence variations from dbSNP and Humsavar for LOC105369781 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000101620 -- 56,026,080(-) C/G/T upstream_transcript_variant
rs1000219368 -- 56,019,782(-) A/C intron_variant
rs1000382000 -- 56,012,713(-) G/A intron_variant
rs1000416922 -- 56,017,617(-) G/A intron_variant
rs1000549665 -- 56,011,791(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369781 Gene

Disorders for LOC105369781 Gene

No disorders were found for LOC105369781 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369781 Gene

Publications for LOC105369781 Gene

No publications were found for LOC105369781 Gene.

No data available for External Links for LOC105369781 Gene

Products for LOC105369781 Gene

Sources for LOC105369781 Gene

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