Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369771 Gene

Subcategory (RNA class) for LOC105369771 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369771 Gene

  • Uncharacterized LOC105369771 3

External Ids for LOC105369771 Gene

Previous GeneCards Identifiers for LOC105369771 Gene

  • GC12U902195

Summaries for LOC105369771 Gene

GeneCards Summary for LOC105369771 Gene

LOC105369771 (Uncharacterized LOC105369771) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369771 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369771 Gene

Genomics for LOC105369771 Gene

GeneHancer (GH) Regulatory Elements for LOC105369771 Gene

Promoters and enhancers for LOC105369771 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J052118 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 600.7 -0.3 -349 2.3 SP1 CTCF ELF3 NKRF RERE ZNF384 ZNF687 NCOA3 RELA HNF1A LOC105369771 ENSG00000257989 HNRNPA3P10 KRT80 KRT86 KRT87P KRT7 EIF4B KRT83 KRT84
GH12J052116 Enhancer 1 Ensembl ENCODE 0.7 +2.1 2146 1.4 ZNF652 NFIB RELA SP1 RAD21 FOSL2 CREB1 ZNF143 CTCF TRIM22 ENSG00000257989 KRT83 LOC105369771
GH12J052121 Enhancer 0.7 ENCODE 0.7 -3.1 -3078 1.3 CTCF RELA RAD21 IKZF1 GLIS2 GATAD2B IKZF2 ZNF143 ZNF740 TRIM22 HNRNPA3P10 KRT80 KRT86 KRT87P KRT7 KRT83 KRT84 KRT6C LOC105369771 GC12P052156
GH12J052143 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.3 -31.8 -31762 14.9 MTA3 CTCF ZNF148 NFIB NCOA3 MAFK MYC SP7 ELF1 KLF14 HNRNPA3P10 EIF4B KRT7-AS KRT5 ENSG00000257989 KRT7 KRT6A OR7E47P IGFBP6 KRT6C
GH12J052124 Enhancer 0.9 ENCODE dbSUPER 0.4 -7.6 -7647 3.4 SP1 MAFK RXRA YBX1 ZNF600 ZIC2 POLR2A SCRT2 ZXDB HDAC2 KRT80 KRT86 KRT87P KRT7 KRT83 KRT84 ENSG00000257989 OR7E47P KRT6C LOC105369771
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369771 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369771 Gene

Genomic Locations for LOC105369771 Gene
chr12:52,105,711-52,118,841
(GRCh38/hg38)
Size:
13,131 bases
Orientation:
Minus strand

Genomic View for LOC105369771 Gene

Genes around LOC105369771 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369771 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369771 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369771 Gene

Proteins for LOC105369771 Gene

Post-translational modifications for LOC105369771 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369771 Gene

Domains & Families for LOC105369771 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369771 Gene

Function for LOC105369771 Gene

Phenotypes From GWAS Catalog for LOC105369771 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369771 Gene

Localization for LOC105369771 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369771 Gene

Pathways & Interactions for LOC105369771 Gene

PathCards logo

SuperPathways for LOC105369771 Gene

No Data Available

Interacting Proteins for LOC105369771 Gene

Gene Ontology (GO) - Biological Process for LOC105369771 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369771 Gene

Drugs & Compounds for LOC105369771 Gene

No Compound Related Data Available

Transcripts for LOC105369771 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369771 Gene

No ASD Table

Relevant External Links for LOC105369771 Gene

GeneLoc Exon Structure for
LOC105369771

No data available for mRNA/cDNA for LOC105369771 Gene

Expression for LOC105369771 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369771 Gene

Orthologs for LOC105369771 Gene

No data available for Orthologs and Evolution for LOC105369771 Gene

Paralogs for LOC105369771 Gene

No data available for Paralogs for LOC105369771 Gene

Variants for LOC105369771 Gene

Sequence variations from dbSNP and Humsavar for LOC105369771 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000143545 -- 52,115,877(-) T/G intron_variant, non_coding_transcript_variant
rs1000201350 -- 52,113,707(-) A/C intron_variant
rs1000221969 -- 52,119,770(-) A/G upstream_transcript_variant
rs1000356020 -- 52,118,286(-) C/T non_coding_transcript_variant
rs1000436558 -- 52,109,291(-) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369771 Gene

Disorders for LOC105369771 Gene

No disorders were found for LOC105369771 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369771 Gene

Publications for LOC105369771 Gene

No publications were found for LOC105369771 Gene.

No data available for External Links for LOC105369771 Gene

Products for LOC105369771 Gene

Sources for LOC105369771 Gene

Content
Loading form....