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Aliases for LOC105369752 Gene

Subcategory (RNA class) for LOC105369752 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369752 Gene

  • Uncharacterized LOC105369752 3

External Ids for LOC105369752 Gene

Previous GeneCards Identifiers for LOC105369752 Gene

  • GC12U902449

Summaries for LOC105369752 Gene

GeneCards Summary for LOC105369752 Gene

LOC105369752 (Uncharacterized LOC105369752) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105369752 include Epiphyseal Dysplasia, Multiple, With Myopia And Conductive Deafness and Platyspondylic Lethal Skeletal Dysplasia, Torrance Type.

Additional gene information for LOC105369752 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369752 Gene

Genomics for LOC105369752 Gene

GeneHancer (GH) Regulatory Elements for LOC105369752 Gene

Promoters and enhancers for LOC105369752 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J047981 Enhancer 0.5 ENCODE 600.7 +1.0 976 0.2 SP5 FOXP1 NFIC ZFHX2 NFIA HMG20A EGR2 LOC105369752 ENSG00000240399 ZNF641 TMEM106C ENSG00000258203 COL2A1
GH12J047962 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 -16.1 -16108 3.5 CTCF ELF3 ZNF121 TFE3 SP7 POLR2A SP1 PPARG KLF14 PRDM1 TMEM106C ENSG00000279840 ENSG00000240399 COL2A1 ENSG00000205537 RAPGEF3 SLC48A1 CCDC184 ASB8 ZNF641
GH12J048000 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE 0.3 +22.5 22464 5.1 ZSCAN21 MYC YY1 SP7 PRDM1 MZF1 CREB1 GLIS2 PKNOX1 IKZF1 COL2A1 ENSG00000240399 OR5BK1P ZNF641 TMEM106C ENSG00000258203 LOC105369752
GH12J047990 Promoter/Enhancer 1.1 Ensembl ENCODE 0.4 +9.7 9717 0.3 IKZF1 CBFB EED RUNX3 BCLAF1 MYC MAX ETV6 TMEM106C VDR PFKM SENP1 ENSG00000240399 LOC105369752 ENSG00000258203 COL2A1
GH12J047977 Promoter 0.5 EPDnew 0.7 -3.2 -3211 0.1 COL2A1 LOC105369752 TMEM106C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369752 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369752 Gene

Genomic Locations for LOC105369752 Gene
chr12:47,980,657-47,982,875
(GRCh38/hg38)
Size:
2,219 bases
Orientation:
Plus strand

Genomic View for LOC105369752 Gene

Genes around LOC105369752 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369752 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369752 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369752 Gene

Proteins for LOC105369752 Gene

Post-translational modifications for LOC105369752 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369752 Gene

Domains & Families for LOC105369752 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369752 Gene

Function for LOC105369752 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369752 Gene

Localization for LOC105369752 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369752 Gene

Pathways & Interactions for LOC105369752 Gene

PathCards logo

SuperPathways for LOC105369752 Gene

No Data Available

Interacting Proteins for LOC105369752 Gene

Gene Ontology (GO) - Biological Process for LOC105369752 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369752 Gene

Drugs & Compounds for LOC105369752 Gene

No Compound Related Data Available

Transcripts for LOC105369752 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369752 Gene

No ASD Table

Relevant External Links for LOC105369752 Gene

GeneLoc Exon Structure for
LOC105369752

No data available for mRNA/cDNA for LOC105369752 Gene

Expression for LOC105369752 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369752 Gene

Orthologs for LOC105369752 Gene

No data available for Orthologs and Evolution for LOC105369752 Gene

Paralogs for LOC105369752 Gene

No data available for Paralogs for LOC105369752 Gene

Variants for LOC105369752 Gene

Sequence variations from dbSNP and Humsavar for LOC105369752 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs111570218 uncertain-significance, likely-benign, Stickler Syndrome, Dominant, Type II Collagenopathies, not specified, Connective tissue disorder 47,982,950(+) C/A/T downstream_transcript_variant
rs1179925303 uncertain-significance, Connective tissue disorder 47,982,567(+) G/A intron_variant
rs1209546147 pathogenic, Skeletal dysplasia 47,980,597(+) C/T upstream_transcript_variant
rs121912865 pathogenic, Osteoarthritis with mild chondrodysplasia 47,982,886(+) G/A downstream_transcript_variant
rs121912866 pathogenic, Stickler syndrome type 1 47,978,698(+) G/A upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369752 Gene

Disorders for LOC105369752 Gene

MalaCards: The human disease database

(11) MalaCards diseases for LOC105369752 Gene - From: GeneCards

- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105369752: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369752 Gene

Publications for LOC105369752 Gene

No publications were found for LOC105369752 Gene.

No data available for External Links for LOC105369752 Gene

Products for LOC105369752 Gene

Sources for LOC105369752 Gene

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