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Aliases for LOC105369747 Gene

Subcategory (RNA class) for LOC105369747 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369747 Gene

  • Uncharacterized LOC105369747 3

External Ids for LOC105369747 Gene

Previous GeneCards Identifiers for LOC105369747 Gene

  • GC12U902373

Summaries for LOC105369747 Gene

GeneCards Summary for LOC105369747 Gene

LOC105369747 (Uncharacterized LOC105369747) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369747 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369747 Gene

Genomics for LOC105369747 Gene

GeneHancer (GH) Regulatory Elements for LOC105369747 Gene

Promoters and enhancers for LOC105369747 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J047306 Enhancer 1 FANTOM5 ENCODE 600.7 -0.5 -492 1.9 CC2D1A CTCF MLLT1 GTF2F1 MAFK RAD21 SMARCA4 PKNOX1 RXRA ARID2 LOC105369747 PPIAP45
GH12J047301 Enhancer 0.7 Ensembl ENCODE 0.7 +4.3 4318 2.9 RFX1 MNT SP1 ATF2 ENSG00000199566 AMIGO2 PCED1B LOC105369747 ENSG00000257925
GH12J047316 Enhancer 0.8 ENCODE 0.4 -9.8 -9847 1.1 MLLT1 SP1 SMARCA4 IKZF1 CAVIN1 RXRA IKZF2 REST CTBP1 FOXA2 ENSG00000199566 AMIGO2 LOC105369747 PPIAP45
GH12J047312 Enhancer 0.7 ENCODE 0.4 -5.5 -5485 1 SP1 IKZF1 RXRA BACH1 IKZF2 FOXA2 DPF2 RUNX3 JUND BCL11A ENSG00000199566 AMIGO2 LOC105369747 PPIAP45
GH12J047297 Enhancer 0.7 Ensembl 0.4 +8.6 8560 3.1 TRIM24 SMARCA4 ZNF512 ZNF24 ZNF512B SP1 FOSL1 DPF2 CHAMP1 ZNF507 RPAP3 ENSG00000258181 LOC105369747 ENSG00000257925
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369747 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369747 Gene

Genomic Locations for LOC105369747 Gene
chr12:47,305,917-47,307,399
(GRCh38/hg38)
Size:
1,483 bases
Orientation:
Minus strand

Genomic View for LOC105369747 Gene

Genes around LOC105369747 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369747 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369747 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369747 Gene

Proteins for LOC105369747 Gene

Post-translational modifications for LOC105369747 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369747 Gene

Domains & Families for LOC105369747 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369747 Gene

Function for LOC105369747 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369747 Gene

Localization for LOC105369747 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369747 Gene

Pathways & Interactions for LOC105369747 Gene

PathCards logo

SuperPathways for LOC105369747 Gene

No Data Available

Interacting Proteins for LOC105369747 Gene

Gene Ontology (GO) - Biological Process for LOC105369747 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369747 Gene

Drugs & Compounds for LOC105369747 Gene

No Compound Related Data Available

Transcripts for LOC105369747 Gene

mRNA/cDNA for LOC105369747 Gene

(2) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369747 Gene

No ASD Table

Relevant External Links for LOC105369747 Gene

GeneLoc Exon Structure for
LOC105369747

Expression for LOC105369747 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369747 Gene

Orthologs for LOC105369747 Gene

No data available for Orthologs and Evolution for LOC105369747 Gene

Paralogs for LOC105369747 Gene

No data available for Paralogs for LOC105369747 Gene

Variants for LOC105369747 Gene

Sequence variations from dbSNP and Humsavar for LOC105369747 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000020297 -- 47,307,574(-) C/G upstream_transcript_variant
rs1001074131 -- 47,306,538(-) T/A non_coding_transcript_variant
rs1001205271 -- 47,305,596(-) A/C downstream_transcript_variant
rs1002488794 -- 47,305,614(-) T/C downstream_transcript_variant
rs1002563069 -- 47,309,216(-) G/C/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369747 Gene

Disorders for LOC105369747 Gene

No disorders were found for LOC105369747 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369747 Gene

Publications for LOC105369747 Gene

No publications were found for LOC105369747 Gene.

No data available for External Links for LOC105369747 Gene

Products for LOC105369747 Gene

Sources for LOC105369747 Gene

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