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Aliases for LOC105369735 Gene

Subcategory (RNA class) for LOC105369735 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369735 Gene

  • Uncharacterized LOC105369735 3

External Ids for LOC105369735 Gene

Previous GeneCards Identifiers for LOC105369735 Gene

  • GC12U902162

Summaries for LOC105369735 Gene

GeneCards Summary for LOC105369735 Gene

LOC105369735 (Uncharacterized LOC105369735) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369735 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369735 Gene

Genomics for LOC105369735 Gene

GeneHancer (GH) Regulatory Elements for LOC105369735 Gene

Promoters and enhancers for LOC105369735 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J040208 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 600.7 +1.5 1538 1.8 NKRF IKZF1 IKZF2 RELA ELF1 NR2F1 STAT1 TCF7L2 CTCF ZNF217 LOC105369735 LRRK2 LINC02471 ENSG00000225342
GH12J040207 Enhancer 0.5 ENCODE dbSUPER 600.7 +0.2 213 0.2 EP300 LOC105369735 LRRK2 ENSG00000225342 LINC02471
GH12J040223 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.3 17306 5.7 SP1 CBFA2T2 NKRF ZNF121 POLR2A ZNF687 ZSCAN21 MAFK YY1 SP7 LRRK2 ENSG00000225342 LINC02471 LOC105369735
GH12J040202 Enhancer 0.9 ENCODE dbSUPER 0.4 -5.2 -5247 0.2 MLLT1 IKZF1 IKZF2 TRIM22 PKNOX1 DPF2 RUNX3 ELF1 BCL11A BMI1 LRRK2 LINC02555 LOC105369735 ENSG00000225342 LINC02471
GH12J040203 Enhancer 0.6 FANTOM5 dbSUPER 0.7 -4.2 -4224 0.3 MLLT1 LRRK2 LOC105369735 ENSG00000225342 LINC02471
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369735 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369735 Gene

Genomic Locations for LOC105369735 Gene
chr12:40,207,541-40,210,471
(GRCh38/hg38)
Size:
2,931 bases
Orientation:
Plus strand

Genomic View for LOC105369735 Gene

Genes around LOC105369735 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369735 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369735 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369735 Gene

Proteins for LOC105369735 Gene

Post-translational modifications for LOC105369735 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369735 Gene

Domains & Families for LOC105369735 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369735 Gene

Function for LOC105369735 Gene

Phenotypes From GWAS Catalog for LOC105369735 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369735 Gene

Localization for LOC105369735 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369735 Gene

Pathways & Interactions for LOC105369735 Gene

PathCards logo

SuperPathways for LOC105369735 Gene

No Data Available

Interacting Proteins for LOC105369735 Gene

Gene Ontology (GO) - Biological Process for LOC105369735 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369735 Gene

Drugs & Compounds for LOC105369735 Gene

No Compound Related Data Available

Transcripts for LOC105369735 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369735 Gene

No ASD Table

Relevant External Links for LOC105369735 Gene

GeneLoc Exon Structure for
LOC105369735

No data available for mRNA/cDNA for LOC105369735 Gene

Expression for LOC105369735 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369735 Gene

Orthologs for LOC105369735 Gene

No data available for Orthologs and Evolution for LOC105369735 Gene

Paralogs for LOC105369735 Gene

No data available for Paralogs for LOC105369735 Gene

Variants for LOC105369735 Gene

Sequence variations from dbSNP and Humsavar for LOC105369735 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1001821288 -- 40,208,860(+) C/T intron_variant
rs1002025839 -- 40,205,834(+) G/A upstream_transcript_variant
rs1003088048 -- 40,207,520(+) C/T non_coding_transcript_variant
rs1003299894 -- 40,207,206(+) T/C upstream_transcript_variant
rs1005271120 -- 40,209,487(+) T/C non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369735 Gene

Disorders for LOC105369735 Gene

No disorders were found for LOC105369735 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369735 Gene

Publications for LOC105369735 Gene

No publications were found for LOC105369735 Gene.

No data available for External Links for LOC105369735 Gene

Products for LOC105369735 Gene

Sources for LOC105369735 Gene

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