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Aliases for LOC105369728 Gene

Aliases for LOC105369728 Gene

  • Serine/Arginine Repetitive Matrix Protein 1 3 3
  • AC010186.1 5

External Ids for LOC105369728 Gene

Previous GeneCards Identifiers for LOC105369728 Gene

  • GC12U902341
  • GC12M010328
  • GC12M010786
  • GC12M011037
  • GC12M011350
  • GC12M011569
  • GC12M011759
  • GC12M011946

Summaries for LOC105369728 Gene

GeneCards Summary for LOC105369728 Gene

LOC105369728 (Serine/Arginine Repetitive Matrix Protein 1) is a Protein Coding gene.

Additional gene information for LOC105369728 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369728 Gene

Genomics for LOC105369728 Gene

GeneHancer (GH) Regulatory Elements for LOC105369728 Gene

Promoters and enhancers for LOC105369728 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J009646 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 650.7 +1.8 1802 10 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 IRF4 SLC30A9 ZNF207 ZNF143 CLEC2D LOC105369728 ENSG00000256594 M6PR LOC642846 EIF2S3B LINC00612 DDX12P KLRB1 CLECL1
GH12J010611 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.2 -959.8 -959810 2.9 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 E2F8 ZNF143 SP3 NFYC MAGOHB ENSG00000213443 KLRA1P EIF2S3B TAS2R43 TAS2R50 SLC25A39P2 LINC02366 HNRNPABP1 LOC100419929
GH12J009642 Enhancer 0.2 dbSUPER 29.3 +10.0 10035 2 ENSG00000272917 GOT2P3 LOC105369728 CLEC2D ENSG00000256594 CLECL1 KLRB1 ENSG00000214776 KLRA1P LOC374443
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105369728 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369728 Gene

Genomic Locations for LOC105369728 Gene
chr12:9,647,014-9,653,535
(GRCh38/hg38)
Size:
6,522 bases
Orientation:
Minus strand
chr12:9,799,610-9,800,605
(GRCh37/hg19)

Genomic View for LOC105369728 Gene

Genes around LOC105369728 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369728 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369728 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369728 Gene

Proteins for LOC105369728 Gene

Post-translational modifications for LOC105369728 Gene

No Post-translational modifications

Other Protein References for LOC105369728 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105369728 Gene

Domains & Families for LOC105369728 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369728 Gene

Function for LOC105369728 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369728 Gene

Localization for LOC105369728 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369728 Gene

Pathways & Interactions for LOC105369728 Gene

SuperPathways for LOC105369728 Gene

No Data Available

Interacting Proteins for LOC105369728 Gene

Gene Ontology (GO) - Biological Process for LOC105369728 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369728 Gene

Drugs & Compounds for LOC105369728 Gene

No Compound Related Data Available

Transcripts for LOC105369728 Gene

mRNA/cDNA for LOC105369728 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369728 Gene

No ASD Table

Relevant External Links for LOC105369728 Gene

GeneLoc Exon Structure for
LOC105369728

Expression for LOC105369728 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369728 Gene

Orthologs for LOC105369728 Gene

Evolution for LOC105369728 Gene

ENSEMBL:
Gene Tree for LOC105369728 (if available)
TreeFam:
Gene Tree for LOC105369728 (if available)

No data available for Orthologs for LOC105369728 Gene

Paralogs for LOC105369728 Gene

No data available for Paralogs for LOC105369728 Gene

Variants for LOC105369728 Gene

Sequence variations from dbSNP and Humsavar for LOC105369728 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000200222 -- 9,651,360(-) G/A intron_variant
rs1001084724 -- 9,649,801(-) C/T intron_variant
rs1001356088 -- 9,652,368(-) G/A intron_variant
rs1001637208 -- 9,646,543(-) T/C downstream_transcript_variant
rs1001917925 -- 9,646,936(-) C/T downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369728 Gene

Disorders for LOC105369728 Gene

No disorders were found for LOC105369728 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369728 Gene

Publications for LOC105369728 Gene

No publications were found for LOC105369728 Gene.

Products for LOC105369728 Gene

Sources for LOC105369728 Gene

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