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Aliases for LOC105369720 Gene

Subcategory (RNA class) for LOC105369720 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369720 Gene

  • Uncharacterized LOC105369720 3

External Ids for LOC105369720 Gene

Previous GeneCards Identifiers for LOC105369720 Gene

  • GC12U902311

Summaries for LOC105369720 Gene

GeneCards Summary for LOC105369720 Gene

LOC105369720 (Uncharacterized LOC105369720) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369720 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369720 Gene

Genomics for LOC105369720 Gene

GeneHancer (GH) Regulatory Elements for LOC105369720 Gene

Promoters and enhancers for LOC105369720 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J030694 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.2 -70.9 -70942 2.8 ZFX ELF3 SIX5 ZNF148 ZSCAN21 NFRKB ZNF24 ZBTB7A YY1 TRIM24 IPO8 ENSG00000285870 DDX11 ENSG00000246331 LOC105369720
GH12J030612 Enhancer 0.9 Ensembl ENCODE 0.4 +10.8 10810 1.3 TFE3 ZNF384 CEBPA GATAD2A SOX13 OSR2 FOXA2 SAP130 ZSCAN9 ZGPAT CAPRIN2 LOC105369719 LOC105369720
GH12J030604 Enhancer 0.9 Ensembl ENCODE 0.4 +20.0 19959 1 ELF3 SP5 ZNF644 KAT8 CEBPA SOX13 FOXA2 SAP130 FOXP1 ZNF614 CAPRIN2 LOC105369719 LOC105369720
GH12J030690 Enhancer 0.7 ENCODE 0.2 -66.8 -66811 1.1 ZNF600 ZEB2 SOX13 ZBTB17 FOS SAP130 FOSL1 TEAD1 ZNF189 JUND IPO8 LOC105369720
GH12J030613 Enhancer 0.3 Ensembl 0.4 +12.4 12358 0.2 ZNF513 CAPRIN2 LOC105369719 LOC105369720
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369720 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369720 Gene

Genomic Locations for LOC105369720 Gene
chr12:30,615,475-30,624,459
(GRCh38/hg38)
Size:
8,985 bases
Orientation:
Minus strand

Genomic View for LOC105369720 Gene

Genes around LOC105369720 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369720 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369720 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369720 Gene

Proteins for LOC105369720 Gene

Post-translational modifications for LOC105369720 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369720 Gene

Domains & Families for LOC105369720 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369720 Gene

Function for LOC105369720 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369720 Gene

Localization for LOC105369720 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369720 Gene

Pathways & Interactions for LOC105369720 Gene

PathCards logo

SuperPathways for LOC105369720 Gene

No Data Available

Interacting Proteins for LOC105369720 Gene

Gene Ontology (GO) - Biological Process for LOC105369720 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369720 Gene

Drugs & Compounds for LOC105369720 Gene

No Compound Related Data Available

Transcripts for LOC105369720 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369720 Gene

No ASD Table

Relevant External Links for LOC105369720 Gene

GeneLoc Exon Structure for
LOC105369720

No data available for mRNA/cDNA for LOC105369720 Gene

Expression for LOC105369720 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369720 Gene

Orthologs for LOC105369720 Gene

No data available for Orthologs and Evolution for LOC105369720 Gene

Paralogs for LOC105369720 Gene

No data available for Paralogs for LOC105369720 Gene

Variants for LOC105369720 Gene

Sequence variations from dbSNP and Humsavar for LOC105369720 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000800243 -- 30,617,098(-) T/C non_coding_transcript_variant
rs1001227386 -- 30,623,268(-) G/T genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001362991 -- 30,623,006(-) C/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1001440258 -- 30,622,724(-) TG/TGTG genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1002118508 -- 30,618,265(-) C/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369720 Gene

Disorders for LOC105369720 Gene

No disorders were found for LOC105369720 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369720 Gene

Publications for LOC105369720 Gene

No publications were found for LOC105369720 Gene.

No data available for External Links for LOC105369720 Gene

Products for LOC105369720 Gene

Sources for LOC105369720 Gene

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