Aliases for LOC105369699 Gene

Subcategory (RNA class) for LOC105369699 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369699 Gene

  • Uncharacterized LOC105369699 3

External Ids for LOC105369699 Gene

Previous GeneCards Identifiers for LOC105369699 Gene

  • GC12U902356

Summaries for LOC105369699 Gene

GeneCards Summary for LOC105369699 Gene

LOC105369699 (Uncharacterized LOC105369699) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369699 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369699 Gene

Genomics for LOC105369699 Gene

GeneHancer (GH) Regulatory Elements for LOC105369699 Gene

Promoters and enhancers for LOC105369699 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J024820 Enhancer 0.9 Ensembl ENCODE 0.6 +3.4 3414 2.6 SP1 JUND ETV6 RELA CREM ZBED1 IKZF1 BACH1 TRIM22 IKZF2 BCAT1 LOC105369699 lnc-SOX5-3
GH12J024813 Enhancer 0.7 ENCODE 0.6 -4.0 -4013 1.5 ETV6 RELA CREM ZBED1 IKZF1 BACH1 IKZF2 TRIM22 EED DPF2 BCAT1 LOC105369699 HSALNG0089877
GH12J024759 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.2 -58.5 -58469 2.4 SMARCE1 NR2F6 CBFA2T2 SMARCA4 TRIM24 MTA1 EGR1 IKZF1 DPF2 GATAD2A HSALNG0089877 ENSG00000255745 LOC105369699
GH12J024836 Enhancer 0.8 Ensembl ENCODE 0.4 +17.9 17899 0.5 CTCF MAX RAD21 PKNOX1 ZNF512 TRIM22 ZNF143 MTA2 YBX1 PRDM1 RF00017-1113 ENSG00000256482 LOC105369699 piR-33303-046 BCAT1
GH12J024823 Enhancer 0.6 Ensembl 0.4 +5.4 5372 0.9 ZNF24 ETV6 ZNF687 CREM TRIM24 ZBTB33 IKZF1 IKZF2 ZNF316 CBFB BCAT1 LOC105369699 lnc-SOX5-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369699 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369699 Gene

Genomic Locations for LOC105369699 Gene
chr12:24,818,670-24,836,555
(GRCh38/hg38)
Size:
17,886 bases
Orientation:
Plus strand

Genomic View for LOC105369699 Gene

Genes around LOC105369699 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369699 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369699 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369699 Gene

Proteins for LOC105369699 Gene

Post-translational modifications for LOC105369699 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369699 Gene

Domains & Families for LOC105369699 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369699 Gene

Function for LOC105369699 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369699 Gene

Localization for LOC105369699 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369699 Gene

Pathways & Interactions for LOC105369699 Gene

PathCards logo

SuperPathways for LOC105369699 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369699 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369699 Gene

Drugs & Compounds for LOC105369699 Gene

No Compound Related Data Available

Transcripts for LOC105369699 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369699 Gene

No ASD Table

Relevant External Links for LOC105369699 Gene

GeneLoc Exon Structure for
LOC105369699

No data available for mRNA/cDNA for LOC105369699 Gene

Expression for LOC105369699 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369699 Gene

Orthologs for LOC105369699 Gene

No data available for Orthologs and Evolution for LOC105369699 Gene

Paralogs for LOC105369699 Gene

No data available for Paralogs for LOC105369699 Gene

Variants for LOC105369699 Gene

Sequence variations from dbSNP and Humsavar for LOC105369699 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000075373 -- 24,832,202(+) A/G genic_downstream_transcript_variant, intron_variant
rs1000169992 -- 24,823,594(+) G/A intron_variant
rs1000281074 -- 24,832,439(+) G/A genic_downstream_transcript_variant, intron_variant
rs1000339544 -- 24,820,507(+) T/C non_coding_transcript_variant
rs1000365493 -- 24,826,925(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369699 Gene

Disorders for LOC105369699 Gene

No disorders were found for LOC105369699 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369699 Gene

Publications for LOC105369699 Gene

No publications were found for LOC105369699 Gene.

No data available for External Links for LOC105369699 Gene

Products for LOC105369699 Gene

Sources for LOC105369699 Gene