LOC105369699 Gene (RNA Gene)

Uncharacterized LOC105369699

GC12P024818
GIFtS:
2
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Aliases for LOC105369699 Gene

Data sources for LOC105369699 Gene:

Subcategory (RNA class) for LOC105369699 Gene

ncRNA

Aliases for LOC105369699 Gene

External Ids for LOC105369699 Gene

Previous GeneCards Identifiers for LOC105369699 Gene

  • GC12U902356

Summaries for LOC105369699 Gene

GeneCards Summary for LOC105369699 Gene

LOC105369699 (Uncharacterized LOC105369699) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369699 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369699 Gene

Genomics for LOC105369699 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105369699 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J024820 Enhancer 0.9 Ensembl ENCODE 0.7 +4.0 4028 2.6 SP1 BCL11A IRF4 TRIM22 CBFB BHLHE40 BATF STAT5A NFATC1 IKZF1 BCAT1 HSALNG0089880 LOC105369699 lnc-SOX5-3 SOX5
GH12J024813 Enhancer 0.7 ENCODE 0.7 -3.4 -3399 1.5 BCL11A IRF4 SPI1 BATF STAT5A NFATC1 IKZF1 MTA3 BMI1 NR2F1 BCAT1 LOC105369699 HSALNG0089879 SOX5
GH12J024836 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.3 +20.6 20564 4.6 SP1 BCL11A CTCF TRIM22 IRF4 PRDM1 EBF1 SMC3 RAD21 SMARCA5 BCAT1 MN309453 ENSG00000256482 RF00017-1113 LOC105369699 SOX5
GH12J024823 Enhancer 0.7 Ensembl 0.4 +6.0 5986 0.9 BCL11A ZNF316 CBFB ZNF24 ATF2 ATF4 IKZF1 ZNF366 SPI1 ZNF687 BCAT1 HSALNG0089880 lnc-SOX5-3 LOC105369699 SOX5
GH12J024832 Enhancer 0.4 Ensembl 0.4 +12.0 12045 0.2 ZNF316 NFE2 MAFG ENSG00000256482 lnc-SOX5-3 HSALNG0089880 LOC105369699 BCAT1 SOX5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369699 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369699 Gene

Latest Assembly
chr12:24,818,056-24,836,555
(GRCh38/hg38)
Size:
18,500 bases
Orientation:
Plus strand

Genomic View for LOC105369699 Gene

Genes around LOC105369699 on UCSC Golden Path with GeneCards custom track
LOC105369699 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105369699 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369699 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105369699 Gene

Proteins for LOC105369699 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for LOC105369699 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369699 Gene

Domains & Families for LOC105369699 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369699 Gene

Function for LOC105369699 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369699 Gene

Localization for LOC105369699 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369699 Gene

Pathways & Interactions for LOC105369699 Gene

PathCards logo

SuperPathways for LOC105369699 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369699 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369699 Gene

Drugs & Compounds for LOC105369699 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC105369699 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research
LOC105369699 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369699 Gene

No ASD Table

Relevant External Links for LOC105369699 Gene

GeneLoc Exon Structure for
LOC105369699

No data available for mRNA/cDNA for LOC105369699 Gene

Expression for LOC105369699 Gene

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  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369699 Gene

Orthologs for LOC105369699 Gene

No data available for Orthologs and Evolution for LOC105369699 Gene

Paralogs for LOC105369699 Gene

No data available for Paralogs for LOC105369699 Gene

Variants for LOC105369699 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105369699 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369699 Gene

Disorders for LOC105369699 Gene

No disorders were found for LOC105369699 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369699 Gene

Publications for LOC105369699 Gene

No publications were found for LOC105369699 Gene.

No data available for Mastermind for LOC105369699 Gene

Products for LOC105369699 Gene

Sources for LOC105369699 Gene