LOC105369696 Gene (RNA Gene)

Uncharacterized LOC105369696

GC12P023738
GIFtS:
2
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Aliases for LOC105369696 Gene

Data sources for LOC105369696 Gene:

Subcategory (RNA class) for LOC105369696 Gene

ncRNA

Aliases for LOC105369696 Gene

External Ids for LOC105369696 Gene

Previous GeneCards Identifiers for LOC105369696 Gene

  • GC12U902141

Summaries for LOC105369696 Gene

GeneCards Summary for LOC105369696 Gene

LOC105369696 (Uncharacterized LOC105369696) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369696 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369696 Gene

Genomics for LOC105369696 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105369696 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J023753 Enhancer 1 Ensembl ENCODE CraniofacialAtlas 250.7 +1.0 979 6 CEBPA HOMEZ FOXA2 TEAD3 RBM22 FOXP1 SOX5 FOXA1 ZBTB33 KDM1A LOC105369696 ENSG00000256473 SOX5 piR-48759-053 lnc-SOX5-5
GH12J023722 Enhancer 1.2 UCNEbase Ensembl 0.3 -32.2 -32236 0.4 TBP IKZF1 MBD2 NONO ARNT TAL1 ATF1 SMARCA4 HDAC2 STAT5A piR-57460-120 LOC105369696 SOX5 lnc-SOX5-5
GH12J023760 Enhancer 0.6 Ensembl ENCODE 0.4 +5.6 5579 0.8 YY1 RBM22 EP300 LOC105369696 piR-48759-053 SOX5 lnc-SOX5-5
GH12J023752 Enhancer 0.3 Ensembl 0.7 -2.5 -2521 0.2 MAFG LOC105369696 piR-57460-120 SOX5 lnc-SOX5-5
GH12J023740 Enhancer 0.2 Ensembl 0.4 -14.3 -14321 0.2 LOC105369696 piR-57460-120 SOX5 lnc-SOX5-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369696 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369696 Gene

Latest Assembly
chr12:23,755,222-23,757,029
(GRCh38/hg38)
Size:
1,808 bases
Orientation:
Plus strand

Genomic View for LOC105369696 Gene

Genes around LOC105369696 on UCSC Golden Path with GeneCards custom track
LOC105369696 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105369696 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369696 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105369696 Gene

Proteins for LOC105369696 Gene

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  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for LOC105369696 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369696 Gene

Domains & Families for LOC105369696 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369696 Gene

Function for LOC105369696 Gene

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  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369696 Gene

Localization for LOC105369696 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369696 Gene

Pathways & Interactions for LOC105369696 Gene

PathCards logo

SuperPathways for LOC105369696 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369696 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369696 Gene

Drugs & Compounds for LOC105369696 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC105369696 Gene

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  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research
LOC105369696 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369696 Gene

No ASD Table

Relevant External Links for LOC105369696 Gene

GeneLoc Exon Structure for
LOC105369696

No data available for mRNA/cDNA for LOC105369696 Gene

Expression for LOC105369696 Gene

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  1. Primer products for research
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369696 Gene

Orthologs for LOC105369696 Gene

No data available for Orthologs and Evolution for LOC105369696 Gene

Paralogs for LOC105369696 Gene

No data available for Paralogs for LOC105369696 Gene

Variants for LOC105369696 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105369696 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369696 Gene

Disorders for LOC105369696 Gene

No disorders were found for LOC105369696 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369696 Gene

Publications for LOC105369696 Gene

No publications were found for LOC105369696 Gene.

No data available for Mastermind for LOC105369696 Gene

Products for LOC105369696 Gene

Sources for LOC105369696 Gene