Aliases for LOC105369689 Gene

Subcategory (RNA class) for LOC105369689 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369689 Gene

  • Uncharacterized LOC105369689 3

External Ids for LOC105369689 Gene

Previous GeneCards Identifiers for LOC105369689 Gene

  • GC12U902286

Summaries for LOC105369689 Gene

GeneCards Summary for LOC105369689 Gene

LOC105369689 (Uncharacterized LOC105369689) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105369689 include Atrial Fibrillation, Familial, 12 and Brugada Syndrome 1.

Additional gene information for LOC105369689 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369689 Gene

Genomics for LOC105369689 Gene

GeneHancer (GH) Regulatory Elements for LOC105369689 Gene

Promoters and enhancers for LOC105369689 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J021677 Enhancer 0.8 Ensembl ENCODE 0.4 +15.6 15588 5.8 CTCF ZNF362 RAD21 ZNF121 ZNF384 REST TRIM22 ETV6 SMC3 GATA3 piR-46501-025 ENSG00000256615 GYS2 LDHB SPX KCNJ8 LOC105369689 piR-55194-086 lnc-KCNJ8-2
GH12J021773 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE CraniofacialAtlas 0.1 +111.4 111441 6.3 ZNF362 RAD21 ZNF148 SP1 SP7 GLIS2 PKNOX1 ZIC2 RXRA PRDM10 KCNJ8 lnc-SPX-4 LDHB RF00994-220 LOC105369689
GH12J021763 Enhancer 0.8 Ensembl ENCODE 0.1 +101.8 101831 1.7 RAD21 SP1 RXRA SCRT2 JUND SCRT1 YY1 ZBTB33 HNF4A REST LDHB ENSG00000255644 RF00994-220 KCNJ8 LOC105369689
GH12J021751 Enhancer 0.6 ENCODE 0.2 +89.4 89429 0.2 RAD21 SP1 PKNOX1 RXRA FOXA2 OSR2 YY1 ZNF423 NFIC GATA3 piR-59297-128 LOC102724261 lnc-KCNJ8-2 LDHB ENSG00000256615 LOC105369689
GH12J021695 Enhancer 0.3 Ensembl ENCODE 0.3 +33.7 33700 1.4 ENSG00000256615 GYS2 piR-46501-025 LOC105369689 piR-55194-086 lnc-KCNJ8-2 LDHB
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369689 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369689 Gene

Genomic Locations for LOC105369689 Gene
chr12:21,662,313-21,828,991
(GRCh38/hg38)
Size:
166,679 bases
Orientation:
Plus strand

Genomic View for LOC105369689 Gene

Genes around LOC105369689 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369689 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369689 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369689 Gene

Proteins for LOC105369689 Gene

Post-translational modifications for LOC105369689 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369689 Gene

Domains & Families for LOC105369689 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369689 Gene

Function for LOC105369689 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369689 Gene

Localization for LOC105369689 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369689 Gene

Pathways & Interactions for LOC105369689 Gene

PathCards logo

SuperPathways for LOC105369689 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369689 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369689 Gene

Drugs & Compounds for LOC105369689 Gene

No Compound Related Data Available

Transcripts for LOC105369689 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369689 Gene

No ASD Table

Relevant External Links for LOC105369689 Gene

GeneLoc Exon Structure for
LOC105369689

No data available for mRNA/cDNA for LOC105369689 Gene

Expression for LOC105369689 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369689 Gene

Orthologs for LOC105369689 Gene

No data available for Orthologs and Evolution for LOC105369689 Gene

Paralogs for LOC105369689 Gene

No data available for Paralogs for LOC105369689 Gene

Variants for LOC105369689 Gene

Sequence variations from dbSNP and Humsavar for LOC105369689 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1060503053 uncertain-significance, Dilated cardiomyopathy 1O 21,815,804(+) C/T intron_variant
rs1060504811 likely-benign, Dilated cardiomyopathy 1O 21,806,013(+) G/A intron_variant
rs112604741 benign, Brugada syndrome 21,773,506(+) G/A intron_variant
rs117808169 uncertain-significance, not provided, Brugada syndrome 21,773,354(+) G/C intron_variant
rs121909304 pathogenic, Dilated cardiomyopathy 1O 21,801,157(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369689 Gene

Disorders for LOC105369689 Gene

MalaCards: The human disease database

(4) MalaCards diseases for LOC105369689 Gene - From: GeneCards

Disorder Aliases PubMed IDs
atrial fibrillation, familial, 12
  • atfb12
brugada syndrome 1
  • brgda1
familial atrial fibrillation
  • atrial fibrillation, familial, 1
brugada syndrome
  • right bundle branch block, st segment elevation, and sudden death syndrome
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105369689: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369689 Gene

Publications for LOC105369689 Gene

No publications were found for LOC105369689 Gene.

No data available for External Links for LOC105369689 Gene

Products for LOC105369689 Gene

Sources for LOC105369689 Gene