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Aliases for LOC105369668 Gene

Subcategory (RNA class) for LOC105369668 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369668 Gene

  • Uncharacterized LOC105369668 3

External Ids for LOC105369668 Gene

Previous GeneCards Identifiers for LOC105369668 Gene

  • GC12U902054

Summaries for LOC105369668 Gene

GeneCards Summary for LOC105369668 Gene

LOC105369668 (Uncharacterized LOC105369668) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105369668 include Epileptic Encephalopathy, Early Infantile, 27.

Additional gene information for LOC105369668 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369668 Gene

Genomics for LOC105369668 Gene

GeneHancer (GH) Regulatory Elements for LOC105369668 Gene

Promoters and enhancers for LOC105369668 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J013578 Enhancer 0.6 dbSUPER 600.7 -1.5 -1545 4.9 SP1 ZNF384 RXRA FOXA2 JUND ZBTB33 FOSL1 HNF4A FOS IKZF1 LOC105369668 ENSG00000256306 GC12M013564 GRIN2B
GH12J013583 Enhancer 0.4 Ensembl dbSUPER 600.7 +1.7 1746 0.4 LOC105369668 GC12P013596 GRIN2B
GH12J013592 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +10.0 10046 1.4 IKZF1 IKZF2 SP1 TRIM22 DPF2 EED RUNX3 BCL11A BMI1 NR2F1 GC12P013596 LOC105369668 GRIN2B
GH12J013569 Enhancer 0.9 ENCODE dbSUPER 0.4 -11.2 -11179 2.8 CBFA2T2 CEBPG SP1 RXRA SOX13 CEBPA TCF7 YY1 ZBTB33 NFIC GC12M013564 LOC105369668 GRIN2B
GH12J013573 Enhancer 0.7 ENCODE dbSUPER 0.4 -8.2 -8153 0.2 CEBPA JUND FOSL2 ATF3 GC12M013564 LOC105369668 GRIN2B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369668 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369668 Gene

Genomic Locations for LOC105369668 Gene
chr12:13,582,055-13,620,069
(GRCh38/hg38)
Size:
38,015 bases
Orientation:
Plus strand

Genomic View for LOC105369668 Gene

Genes around LOC105369668 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369668 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369668 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369668 Gene

Proteins for LOC105369668 Gene

Post-translational modifications for LOC105369668 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369668 Gene

Domains & Families for LOC105369668 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369668 Gene

Function for LOC105369668 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369668 Gene

Localization for LOC105369668 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369668 Gene

Pathways & Interactions for LOC105369668 Gene

PathCards logo

SuperPathways for LOC105369668 Gene

No Data Available

Interacting Proteins for LOC105369668 Gene

Gene Ontology (GO) - Biological Process for LOC105369668 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369668 Gene

Drugs & Compounds for LOC105369668 Gene

No Compound Related Data Available

Transcripts for LOC105369668 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369668 Gene

No ASD Table

Relevant External Links for LOC105369668 Gene

GeneLoc Exon Structure for
LOC105369668

No data available for mRNA/cDNA for LOC105369668 Gene

Expression for LOC105369668 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369668 Gene

Orthologs for LOC105369668 Gene

No data available for Orthologs and Evolution for LOC105369668 Gene

Paralogs for LOC105369668 Gene

No data available for Paralogs for LOC105369668 Gene

Variants for LOC105369668 Gene

Sequence variations from dbSNP and Humsavar for LOC105369668 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1057518700 likely-pathogenic, Mental retardation, autosomal dominant 6 13,608,792(+) C/G/T intron_variant
rs1057519004 likely-pathogenic, uncertain-significance, intellectual deficiency, not specified 13,611,833(+) C/T intron_variant
rs1060499659 likely-pathogenic, Epileptic encephalopathy, early infantile, 27 13,615,170(+) C/T non_coding_transcript_variant
rs1135401799 pathogenic, Epileptic encephalopathy, early infantile, 27 13,608,647(+) G/A intron_variant, non_coding_transcript_variant
rs141031272 benign, not specified, Epileptic encephalopathy, early infantile, 27, Mental retardation, autosomal dominant 6 13,615,655(+) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369668 Gene

Disorders for LOC105369668 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105369668 Gene - From: GeneCards

Disorder Aliases PubMed IDs
epileptic encephalopathy, early infantile, 27
  • eiee27
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105369668: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369668 Gene

Publications for LOC105369668 Gene

No publications were found for LOC105369668 Gene.

No data available for External Links for LOC105369668 Gene

Products for LOC105369668 Gene

Sources for LOC105369668 Gene

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