Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369653 Gene

Subcategory (RNA class) for LOC105369653 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105369653 Gene

  • Uncharacterized LOC105369653 3

External Ids for LOC105369653 Gene

Previous GeneCards Identifiers for LOC105369653 Gene

  • GC12U902440

Summaries for LOC105369653 Gene

GeneCards Summary for LOC105369653 Gene

LOC105369653 (Uncharacterized LOC105369653) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369653 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369653 Gene

Genomics for LOC105369653 Gene

GeneHancer (GH) Regulatory Elements for LOC105369653 Gene

Promoters and enhancers for LOC105369653 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I009767 Enhancer 0.3 dbSUPER 550.8 -0.8 -838 1.3 SCRT2 LOC105369653 CLEC2D CD69
GH12I009756 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.9 -7900 10 HDGF PKNOX1 ATF1 SMAD1 ARNT IRF4 TCF12 POLR2B GATA2 ATF7 CD69 CLECL1 KLRF1 CLEC7A OLR1 KLRB1 CLEC12A ENSG00000213443 DDX12P PZP
GH12I009773 Enhancer 0.6 FANTOM5 ENCODE dbSUPER 0.8 +4.5 4536 0.3 CD69 CLECL1 CLEC2A LOC105369653 LOC100419929
GH12I009792 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +26.5 26463 6.3 PKNOX1 ATF1 ARNT IRF4 ARID2 ZNF143 ATF7 FOS RUNX3 DEK CD69 CLEC7A LOC728715 CLEC2B OLR1 LOC100419929 LOC105369653
GH12I009813 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 +45.1 45079 1.3 CTCF PKNOX1 BACH1 ZNF76 SIN3A EBF1 ZIC2 ZNF2 IRF4 RAD21 KLRF1 KLRD1 CD69 KLRB1 A2MP1 CLEC2B KLRF2 LOC100419929 LOC105369653
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105369653 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369653 Gene

Genomic Locations for LOC105369653 Gene
chr12:9,769,179-9,822,815
(GRCh38/hg38)
Size:
53,637 bases
Orientation:
Plus strand

Genomic View for LOC105369653 Gene

Genes around LOC105369653 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369653 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369653 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369653 Gene

Proteins for LOC105369653 Gene

Post-translational modifications for LOC105369653 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369653 Gene

Domains & Families for LOC105369653 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369653 Gene

Function for LOC105369653 Gene

Phenotypes From GWAS Catalog for LOC105369653 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369653 Gene

Localization for LOC105369653 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369653 Gene

Pathways & Interactions for LOC105369653 Gene

SuperPathways for LOC105369653 Gene

No Data Available

Interacting Proteins for LOC105369653 Gene

Gene Ontology (GO) - Biological Process for LOC105369653 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369653 Gene

Drugs & Compounds for LOC105369653 Gene

No Compound Related Data Available

Transcripts for LOC105369653 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369653 Gene

No ASD Table

Relevant External Links for LOC105369653 Gene

GeneLoc Exon Structure for
LOC105369653

No data available for mRNA/cDNA for LOC105369653 Gene

Expression for LOC105369653 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369653 Gene

Orthologs for LOC105369653 Gene

No data available for Orthologs and Evolution for LOC105369653 Gene

Paralogs for LOC105369653 Gene

No data available for Paralogs for LOC105369653 Gene

Variants for LOC105369653 Gene

Sequence variations from dbSNP and Humsavar for LOC105369653 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000058159 -- 9,792,718(+) G/T intron_variant
rs1000185847 -- 9,778,282(+) G/T intron_variant
rs1000249516 -- 9,799,000(+) AAAAAAAAAA/AAAAAAAAA/AAAAAAAAAAA/AAAAAAAAAAAA intron_variant
rs1000256797 -- 9,778,571(+) G/A intron_variant
rs1000299093 -- 9,798,418(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369653 Gene

Disorders for LOC105369653 Gene

No disorders were found for LOC105369653 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369653 Gene

Publications for LOC105369653 Gene

No publications were found for LOC105369653 Gene.

Products for LOC105369653 Gene

Sources for LOC105369653 Gene

Content
Loading form....