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Aliases for LOC105369649 Gene

Subcategory (RNA class) for LOC105369649 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105369649 Gene

  • Uncharacterized LOC105369649 3

External Ids for LOC105369649 Gene

Previous GeneCards Identifiers for LOC105369649 Gene

  • GC12U902390
  • GC12M009865
  • GC12M010777
  • GC12M011028
  • GC12M011345
  • GC12M011567
  • GC12M011757

Summaries for LOC105369649 Gene

GeneCards Summary for LOC105369649 Gene

LOC105369649 (Uncharacterized LOC105369649) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369649 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369649 Gene

Genomics for LOC105369649 Gene

GeneHancer (GH) Regulatory Elements for LOC105369649 Gene

Promoters and enhancers for LOC105369649 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I009346 Enhancer 0.8 ENCODE 550.8 -0.6 -627 1.5 ATF1 NFRKB ZBTB40 ZNF766 ZBTB11 USF2 CEBPB HDAC8 ZNF148 MEF2D GC12P009724 GC12P009726 GC12P009727 GC12P009728 GC12P009730 GC12P009732 GC12P009738 GC12P009741 GC12P009742 LOC105369649
GH12I009339 Enhancer 0.7 ENCODE 0.4 +6.3 6280 1.5 MEIS2 PKNOX1 ATF1 ZBTB21 JUN ETV1 CEBPG ZNF644 FOSL1 ZNF766 GC12M012022 GC12M012029 GC12M012033 GC12M012065 GC12M012074 GC12M012087 PIR46838 PIR55942 PIR56679 PIR56799
GH12I009344 Enhancer 0.3 ENCODE 0.8 +2.0 2016 0.2 CEBPG GC12M012039 GC12M012054 GC12M012062 GC12M012069 GC12M012092 PIR50133 PIR33842 PIR42932 PIR43421 PIR43627
GH12I009333 Enhancer 0.6 ENCODE 0.4 +12.1 12127 3.2 ZNF639 MAFG BACH1 EBF1 RAD21 ZBTB40 ZNF395 ZNF316 POLR2A NFE2 GC12M012021 GC12M012026 GC12M012028 GC12M012030 GC12M012050 GC12M012051 GC12M012056 GC12M012058 GC12M012061 GC12M012063
GH12I009341 Enhancer 0.3 ENCODE 0.4 +5.4 5396 0.2 SCRT2 GC12M012022 GC12M012033 GC12M012057 GC12M012065 GC12M012069 GC12M012074 GC12M012087 PIR46838 PIR55942 PIR50177
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105369649 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369649 Gene

Genomic Locations for LOC105369649 Gene
chr12:9,334,243-9,346,756
(GRCh38/hg38)
Size:
12,514 bases
Orientation:
Minus strand

Genomic View for LOC105369649 Gene

Genes around LOC105369649 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369649 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369649 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369649 Gene

Proteins for LOC105369649 Gene

Post-translational modifications for LOC105369649 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369649 Gene

Domains & Families for LOC105369649 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369649 Gene

Function for LOC105369649 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369649 Gene

Localization for LOC105369649 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369649 Gene

Pathways & Interactions for LOC105369649 Gene

SuperPathways for LOC105369649 Gene

No Data Available

Interacting Proteins for LOC105369649 Gene

Gene Ontology (GO) - Biological Process for LOC105369649 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369649 Gene

Drugs & Compounds for LOC105369649 Gene

No Compound Related Data Available

Transcripts for LOC105369649 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369649 Gene

No ASD Table

Relevant External Links for LOC105369649 Gene

GeneLoc Exon Structure for
LOC105369649

No data available for mRNA/cDNA for LOC105369649 Gene

Expression for LOC105369649 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369649 Gene

Orthologs for LOC105369649 Gene

No data available for Orthologs and Evolution for LOC105369649 Gene

Paralogs for LOC105369649 Gene

No data available for Paralogs for LOC105369649 Gene

Variants for LOC105369649 Gene

Sequence variations from dbSNP and Humsavar for LOC105369649 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000096507 -- 9,347,877(-) G/A upstream_transcript_variant
rs1000180120 -- 9,334,052(-) G/A downstream_transcript_variant
rs1000338541 -- 9,346,307(-) T/A intron_variant
rs1000841658 -- 9,344,493(-) A/G intron_variant
rs1001033852 -- 9,338,223(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369649 Gene

Disorders for LOC105369649 Gene

Additional Disease Information for LOC105369649

No disorders were found for LOC105369649 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105369649 Gene

Publications for LOC105369649 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 3 58

Products for LOC105369649 Gene

Sources for LOC105369649 Gene

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