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Aliases for LOC105369632 Gene

Subcategory (RNA class) for LOC105369632 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369632 Gene

  • Uncharacterized LOC105369632 3

External Ids for LOC105369632 Gene

Previous GeneCards Identifiers for LOC105369632 Gene

  • GC12U902303

Summaries for LOC105369632 Gene

GeneCards Summary for LOC105369632 Gene

LOC105369632 (Uncharacterized LOC105369632) is an RNA Gene, and is affiliated with the ncRNA class. Among its related pathways are Innate Immune System and Class I MHC mediated antigen processing and presentation.

Additional gene information for LOC105369632 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369632 Gene

Genomics for LOC105369632 Gene

GeneHancer (GH) Regulatory Elements for LOC105369632 Gene

Promoters and enhancers for LOC105369632 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J006890 Enhancer 1.4 FANTOM5 ENCODE 600.7 -1.0 -983 1.8 ZNF652 SP1 CC2D1A ELF3 MNT CBFA2T2 ZNF148 NKRF POLR2A ZNF121 SPSB2 LOC105369632 ZNF384 CHD4 ENSG00000219410 ENSG00000247853 NOP2 SCARNA12 ACRBP CD4
GH12J006880 Enhancer 1 Ensembl ENCODE 0.4 +9.9 9853 2.7 ZNF652 MNT CEBPG TFE3 SP1 HNF1A CEBPA GATAD2A REST ZNF205 SPSB2 USP5 CDCA3 GNB3 ATN1 RNU7-1 C12orf57 P3H3 GPR162 CD4
GH12J006885 Enhancer 0.4 ENCODE 0.7 +3.3 3340 2.6 IKZF1 CEBPA SIN3A SPSB2 ENO2 ATN1 CDCA3 USP5 RNU7-1 C12orf57 SCARNA12 PHB2 EMG1
GH12J006875 Enhancer 0.6 ENCODE 0.4 +14.4 14419 0.2 CBFA2T2 IKZF1 TCF12 MGA TRIM24 NCOR1 BCOR DPF2 TAL1 KLF16 RPL13P5 LRRC23 DSTNP2 LOC105369632 SPSB2
GH12J006893 Enhancer 0.4 Ensembl 0.7 -4.1 -4110 2.2 ZSCAN5C ZEB1 LRRC23 LOC105369632 ENSG00000275703
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369632 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369632 Gene

Genomic Locations for LOC105369632 Gene
chr12:6,875,765-6,890,191
(GRCh38/hg38)
Size:
14,427 bases
Orientation:
Minus strand

Genomic View for LOC105369632 Gene

Genes around LOC105369632 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369632 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369632 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369632 Gene

Proteins for LOC105369632 Gene

Post-translational modifications for LOC105369632 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369632 Gene

Domains & Families for LOC105369632 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369632 Gene

Function for LOC105369632 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369632 Gene

Localization for LOC105369632 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369632 Gene

Pathways & Interactions for LOC105369632 Gene

genes like me logo Genes that share pathways with LOC105369632: view

Interacting Proteins for LOC105369632 Gene

Gene Ontology (GO) - Biological Process for LOC105369632 Gene

None

No data available for SIGNOR curated interactions for LOC105369632 Gene

Drugs & Compounds for LOC105369632 Gene

No Compound Related Data Available

Transcripts for LOC105369632 Gene

mRNA/cDNA for LOC105369632 Gene

(1) Additional mRNA sequences :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369632 Gene

No ASD Table

Relevant External Links for LOC105369632 Gene

GeneLoc Exon Structure for
LOC105369632

Expression for LOC105369632 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369632 Gene

Orthologs for LOC105369632 Gene

No data available for Orthologs and Evolution for LOC105369632 Gene

Paralogs for LOC105369632 Gene

No data available for Paralogs for LOC105369632 Gene

Variants for LOC105369632 Gene

Sequence variations from dbSNP and Humsavar for LOC105369632 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1001006080 -- 6,886,684(-) G/T intron_variant
rs1001101007 -- 6,875,431(-) C/T downstream_transcript_variant
rs1001130864 -- 6,887,182(-) A/G intron_variant
rs1001443356 -- 6,887,056(-) C/T intron_variant
rs1002227555 -- 6,875,864(-) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369632 Gene

Disorders for LOC105369632 Gene

No disorders were found for LOC105369632 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369632 Gene

Publications for LOC105369632 Gene

No publications were found for LOC105369632 Gene.

No data available for External Links for LOC105369632 Gene

Products for LOC105369632 Gene

Sources for LOC105369632 Gene

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