Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369626 Gene

Subcategory (RNA class) for LOC105369626 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369626 Gene

  • Uncharacterized LOC105369626 3

External Ids for LOC105369626 Gene

Previous GeneCards Identifiers for LOC105369626 Gene

  • GC12U902080

Summaries for LOC105369626 Gene

GeneCards Summary for LOC105369626 Gene

LOC105369626 (Uncharacterized LOC105369626) is an RNA Gene, and is affiliated with the ncRNA class. Diseases associated with LOC105369626 include Bronchiectasis With Or Without Elevated Sweat Chloride 2.

Additional gene information for LOC105369626 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369626 Gene

Genomics for LOC105369626 Gene

GeneHancer (GH) Regulatory Elements for LOC105369626 Gene

Promoters and enhancers for LOC105369626 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J006359 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.7 -3.4 -3440 5.4 ZNF652 ELF3 POLR2A MLLT1 AHR NCOA3 MAFK TFE3 ELF1 SP1 SCNN1A PLEKHG6 CD27-AS1 TAPBPL VAMP1 VWF LOC105369626 GC12P006346
GH12J006369 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.8 8788 8.7 SP1 ELF3 ZNF148 RERE ZSCAN21 ELF1 SP7 HNF1A PPARG SP5 SCNN1A LTBR ENSG00000256433 LOC105369626
GH12J006344 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -18.7 -18673 3.5 CC2D1A CBFA2T2 GTF2F1 ZSCAN21 BACH1 MAFK TRIM24 SP7 EGR1 ZNF639 GC12P006346 CHD4 ENSG00000219410 ZNF384 ENSG00000247853 PHB2 LTBR SCNN1A VAMP1 C1RL-AS1
GH12J006367 Enhancer 1.1 ENCODE dbSUPER 0.7 +3.0 2974 2.1 CTCF ELF3 ZNF148 ZNF121 ZNF384 SP1 RAD21 GLIS2 RXRA ZNF600 VAMP1 LOC105369626 LTBR SCNN1A
GH12J006370 Enhancer 0.6 dbSUPER 0.7 +4.1 4143 0.2 GLIS2 ZIC2 ZNF341 ZFHX2 KLF17 HIC1 IKZF5 GLIS1 ZNF398 ZNF785 LOC105369626 SCNN1A LTBR
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369626 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369626 Gene

Genomic Locations for LOC105369626 Gene
chr12:6,365,329-6,374,352
(GRCh38/hg38)
Size:
9,024 bases
Orientation:
Plus strand

Genomic View for LOC105369626 Gene

Genes around LOC105369626 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369626 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369626 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369626 Gene

Proteins for LOC105369626 Gene

Post-translational modifications for LOC105369626 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369626 Gene

Domains & Families for LOC105369626 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369626 Gene

Function for LOC105369626 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369626 Gene

Localization for LOC105369626 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369626 Gene

Pathways & Interactions for LOC105369626 Gene

PathCards logo

SuperPathways for LOC105369626 Gene

No Data Available

Interacting Proteins for LOC105369626 Gene

Gene Ontology (GO) - Biological Process for LOC105369626 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369626 Gene

Drugs & Compounds for LOC105369626 Gene

No Compound Related Data Available

Transcripts for LOC105369626 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369626 Gene

No ASD Table

Relevant External Links for LOC105369626 Gene

GeneLoc Exon Structure for
LOC105369626

No data available for mRNA/cDNA for LOC105369626 Gene

Expression for LOC105369626 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369626 Gene

Orthologs for LOC105369626 Gene

No data available for Orthologs and Evolution for LOC105369626 Gene

Paralogs for LOC105369626 Gene

No data available for Paralogs for LOC105369626 Gene

Variants for LOC105369626 Gene

Sequence variations from dbSNP and Humsavar for LOC105369626 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs111317117 likely-benign, Pseudohypoaldosteronism type 1 autosomal recessive, Cystic Fibrosis-Like Syndrome 6,363,434(+) G/A/C upstream_transcript_variant
rs13306619 likely-benign, Pseudohypoaldosteronism type 1 autosomal recessive, Cystic Fibrosis-Like Syndrome 6,374,685(+) G/A downstream_transcript_variant
rs144763378 likely-benign, Pseudohypoaldosteronism type 1 autosomal recessive, Cystic Fibrosis-Like Syndrome 6,374,465(+) C/T downstream_transcript_variant
rs150809388 likely-benign, benign, Pseudohypoaldosteronism type 1 autosomal recessive, Cystic Fibrosis-Like Syndrome, not specified 6,374,831(+) T/C downstream_transcript_variant
rs55797039 benign, likely-benign, not specified, Cystic Fibrosis-Like Syndrome, Pseudohypoaldosteronism type 1 autosomal recessive 6,363,586(+) G/A/T upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369626 Gene

Disorders for LOC105369626 Gene

MalaCards: The human disease database

(1) MalaCards diseases for LOC105369626 Gene - From: GeneCards

Disorder Aliases PubMed IDs
bronchiectasis with or without elevated sweat chloride 2
  • cystic fibrosis-like syndrome
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with LOC105369626: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369626 Gene

Publications for LOC105369626 Gene

No publications were found for LOC105369626 Gene.

No data available for External Links for LOC105369626 Gene

Products for LOC105369626 Gene

Sources for LOC105369626 Gene

Content
Loading form....