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Aliases for LOC105369624 Gene

Subcategory (RNA class) for LOC105369624 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369624 Gene

  • Uncharacterized LOC105369624 3

External Ids for LOC105369624 Gene

Previous GeneCards Identifiers for LOC105369624 Gene

  • GC12U901985

Summaries for LOC105369624 Gene

GeneCards Summary for LOC105369624 Gene

LOC105369624 (Uncharacterized LOC105369624) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369624 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369624 Gene

Genomics for LOC105369624 Gene

GeneHancer (GH) Regulatory Elements for LOC105369624 Gene

Promoters and enhancers for LOC105369624 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J006291 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.2 -185 6.7 ELF3 CEBPG NFIB SP7 SP1 PPARG PRDM1 ZNF384 SMARCA4 KAT8 LOC105369624 CD9 PLEKHG6 ATP5MFP5
GH12J006284 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -8.7 -8657 4 CC2D1A CTCF ELF3 ZNF121 TFE3 SP7 SP5 ZNF384 EGR1 RAD21 CD9 LOC105369624 ATP5MFP5
GH12J006276 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.4 -15.9 -15864 4.9 ZNF652 ZFX ELF3 MNT NKRF ZNF121 ZNF687 ZSCAN21 MAFK TFE3 ZNF384 CHD4 CD9 PLEKHG6 ATP5MFP5 LOC105369624
GH12J006271 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -21.9 -21945 3.7 SP7 IKZF1 CREB1 RFX1 PRDM10 ZIC2 ZNF341 SCRT2 CTBP1 EGR1 CD9 PLEKHG6 ACRBP ATP5MFP5 LOC105369624
GH12J006302 Enhancer 0.4 ENCODE dbSUPER 0.4 +8.2 8191 1.5 CD27-AS1 TAPBPL CD9 IFFO1 VWF NOP2 CHD4 PLEKHG6 LOC105369624
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369624 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369624 Gene

Genomic Locations for LOC105369624 Gene
chr12:6,295,280-6,297,489
(GRCh38/hg38)
Size:
2,210 bases
Orientation:
Plus strand

Genomic View for LOC105369624 Gene

Genes around LOC105369624 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369624 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369624 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369624 Gene

Proteins for LOC105369624 Gene

Post-translational modifications for LOC105369624 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369624 Gene

Domains & Families for LOC105369624 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369624 Gene

Function for LOC105369624 Gene

Phenotypes From GWAS Catalog for LOC105369624 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369624 Gene

Localization for LOC105369624 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369624 Gene

Pathways & Interactions for LOC105369624 Gene

PathCards logo

SuperPathways for LOC105369624 Gene

No Data Available

Interacting Proteins for LOC105369624 Gene

Gene Ontology (GO) - Biological Process for LOC105369624 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369624 Gene

Drugs & Compounds for LOC105369624 Gene

No Compound Related Data Available

Transcripts for LOC105369624 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369624 Gene

No ASD Table

Relevant External Links for LOC105369624 Gene

GeneLoc Exon Structure for
LOC105369624

No data available for mRNA/cDNA for LOC105369624 Gene

Expression for LOC105369624 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369624 Gene

Orthologs for LOC105369624 Gene

No data available for Orthologs and Evolution for LOC105369624 Gene

Paralogs for LOC105369624 Gene

No data available for Paralogs for LOC105369624 Gene

Variants for LOC105369624 Gene

Sequence variations from dbSNP and Humsavar for LOC105369624 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000037992 -- 6,296,376(+) GGAA/GGAAGGAA intron_variant
rs1001475177 -- 6,297,371(+) G/C non_coding_transcript_variant
rs1001765961 -- 6,297,027(+) G/A/C intron_variant
rs1003988884 -- 6,295,654(+) C/T intron_variant
rs1004409566 -- 6,297,940(+) C/A/T downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369624 Gene

Disorders for LOC105369624 Gene

No disorders were found for LOC105369624 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369624 Gene

Publications for LOC105369624 Gene

No publications were found for LOC105369624 Gene.

No data available for External Links for LOC105369624 Gene

Products for LOC105369624 Gene

Sources for LOC105369624 Gene

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