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Aliases for LOC105369623 Gene

Subcategory (RNA class) for LOC105369623 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369623 Gene

  • Uncharacterized LOC105369623 3

External Ids for LOC105369623 Gene

Previous GeneCards Identifiers for LOC105369623 Gene

  • GC12U902260

Summaries for LOC105369623 Gene

GeneCards Summary for LOC105369623 Gene

LOC105369623 (Uncharacterized LOC105369623) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369623 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369623 Gene

Genomics for LOC105369623 Gene

GeneHancer (GH) Regulatory Elements for LOC105369623 Gene

Promoters and enhancers for LOC105369623 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J006177 Promoter/Enhancer 2 EPDnew FANTOM5 ENCODE dbSUPER 600.7 -0.3 -296 6.8 ELF3 MLLT1 CEBPG GTF2F1 MAFK TFE3 SP1 PPARG SP5 ZNF644 CD9 LOC105369623 ENSG00000247853 SPSB2 NCAPD2 ZNF384 ENSG00000219410 VWF
GH12J006166 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.9 12851 3.9 SP1 ZKSCAN8 CBFA2T2 MLLT1 GTF2F1 BACH1 TRIM24 SP7 CREM PRDM1 PIR38862 CD9 VWF ATN1 NTF3 TNFRSF1A TAPBPL VAMP1 PIR39839 LOC105369623
GH12J006195 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 -15.1 -15061 1.5 CC2D1A ELF3 CTCF CEBPG ZNF24 SP1 KLF14 PRDM1 MLLT1 RAD21 VWF CD9 LOC105369623
GH12J006170 Enhancer 0.8 ENCODE dbSUPER 0.4 +8.8 8756 2.8 CTCF SP1 EGR1 NFIC NR2F2 CREM JUN MAX POLR2A VEZF1 LOC105369622 ENSG00000219410 ZNF384 CD9 ENSG00000247853 NCAPD2 CHD4 SPSB2 VWF EMG1
GH12J006193 Enhancer 0.9 ENCODE dbSUPER 0.4 -13.1 -13058 1.4 CBFA2T2 CREB1 PKNOX1 ATF7 ZNF629 CEBPB SP2 ATF2 ZBTB17 WT1 VWF CD9 LOC105369623
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369623 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369623 Gene

Genomic Locations for LOC105369623 Gene
chr12:6,169,855-6,180,941
(GRCh38/hg38)
Size:
11,087 bases
Orientation:
Minus strand

Genomic View for LOC105369623 Gene

Genes around LOC105369623 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369623 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369623 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369623 Gene

Proteins for LOC105369623 Gene

Post-translational modifications for LOC105369623 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369623 Gene

Domains & Families for LOC105369623 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369623 Gene

Function for LOC105369623 Gene

Phenotypes From GWAS Catalog for LOC105369623 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369623 Gene

Localization for LOC105369623 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369623 Gene

Pathways & Interactions for LOC105369623 Gene

PathCards logo

SuperPathways for LOC105369623 Gene

No Data Available

Interacting Proteins for LOC105369623 Gene

Gene Ontology (GO) - Biological Process for LOC105369623 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369623 Gene

Drugs & Compounds for LOC105369623 Gene

No Compound Related Data Available

Transcripts for LOC105369623 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369623 Gene

No ASD Table

Relevant External Links for LOC105369623 Gene

GeneLoc Exon Structure for
LOC105369623

No data available for mRNA/cDNA for LOC105369623 Gene

Expression for LOC105369623 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369623 Gene

Orthologs for LOC105369623 Gene

No data available for Orthologs and Evolution for LOC105369623 Gene

Paralogs for LOC105369623 Gene

No data available for Paralogs for LOC105369623 Gene

Variants for LOC105369623 Gene

Sequence variations from dbSNP and Humsavar for LOC105369623 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000410308 -- 6,175,937(-) G/A intron_variant
rs1000522232 -- 6,171,575(-) C/T intron_variant
rs1000616606 -- 6,170,953(-) C/T intron_variant
rs1001131607 -- 6,174,498(-) G/A intron_variant
rs1001214891 -- 6,176,357(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369623 Gene

Disorders for LOC105369623 Gene

No disorders were found for LOC105369623 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369623 Gene

Publications for LOC105369623 Gene

No publications were found for LOC105369623 Gene.

No data available for External Links for LOC105369623 Gene

Products for LOC105369623 Gene

Sources for LOC105369623 Gene

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