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Aliases for LOC105369579 Gene

Subcategory (RNA class) for LOC105369579 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369579 Gene

  • Uncharacterized LOC105369579 3

External Ids for LOC105369579 Gene

Previous GeneCards Identifiers for LOC105369579 Gene

  • GC11U902627

Summaries for LOC105369579 Gene

GeneCards Summary for LOC105369579 Gene

LOC105369579 (Uncharacterized LOC105369579) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369579 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369579 Gene

Genomics for LOC105369579 Gene

GeneHancer (GH) Regulatory Elements for LOC105369579 Gene

Promoters and enhancers for LOC105369579 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J131098 Enhancer 0.9 Ensembl ENCODE 0.4 -15.8 -15797 1.1 ELF3 TFE3 CEBPA GATAD2A SOX13 TCF7 SMARCC2 FOXA1 FOXA2 FOS GC11P131101 LOC105369579
GH11J131063 Enhancer 0.8 Ensembl ENCODE 0.4 +19.3 19286 1.6 CTCF RAD21 REST TRIM22 RUNX3 SMC3 ZNF654 ZNF143 LOC105369579 RN7SL167P
GH11J131032 Enhancer 0.9 Ensembl ENCODE 0.2 +50.1 50134 2.1 MAFK EGR1 SMARCA4 NFE2L2 ZNF316 CTBP1 NFE2 EHMT2 FOS MAFG RN7SL167P LOC105369579
GH11J131095 Enhancer 0.3 Ensembl 0.4 -12.3 -12333 0.4 EBF1 GC11P131101 LOC105369579
GH11J131051 Enhancer 0.4 Ensembl 0.3 +31.8 31767 1.4 FOXA2 MAFG EMSY LOC105369579 RN7SL167P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369579 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369579 Gene

Genomic Locations for LOC105369579 Gene
chr11:131,074,923-131,083,468
(GRCh38/hg38)
Size:
8,546 bases
Orientation:
Minus strand

Genomic View for LOC105369579 Gene

Genes around LOC105369579 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369579 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369579 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369579 Gene

Proteins for LOC105369579 Gene

Post-translational modifications for LOC105369579 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369579 Gene

Domains & Families for LOC105369579 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369579 Gene

Function for LOC105369579 Gene

Phenotypes From GWAS Catalog for LOC105369579 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369579 Gene

Localization for LOC105369579 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369579 Gene

Pathways & Interactions for LOC105369579 Gene

PathCards logo

SuperPathways for LOC105369579 Gene

No Data Available

Interacting Proteins for LOC105369579 Gene

Gene Ontology (GO) - Biological Process for LOC105369579 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369579 Gene

Drugs & Compounds for LOC105369579 Gene

No Compound Related Data Available

Transcripts for LOC105369579 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369579 Gene

No ASD Table

Relevant External Links for LOC105369579 Gene

GeneLoc Exon Structure for
LOC105369579

No data available for mRNA/cDNA for LOC105369579 Gene

Expression for LOC105369579 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369579 Gene

Orthologs for LOC105369579 Gene

No data available for Orthologs and Evolution for LOC105369579 Gene

Paralogs for LOC105369579 Gene

No data available for Paralogs for LOC105369579 Gene

Variants for LOC105369579 Gene

Sequence variations from dbSNP and Humsavar for LOC105369579 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000271109 -- 131,085,397(-) A/G upstream_transcript_variant
rs1000332162 -- 131,078,640(-) G/T genic_downstream_transcript_variant, intron_variant, non_coding_transcript_variant
rs1000464466 -- 131,081,973(-) G/A intron_variant
rs1000904104 -- 131,077,270(-) G/T genic_downstream_transcript_variant, intron_variant
rs1001123390 -- 131,075,785(-) G/T genic_downstream_transcript_variant, non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369579 Gene

Disorders for LOC105369579 Gene

No disorders were found for LOC105369579 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369579 Gene

Publications for LOC105369579 Gene

No publications were found for LOC105369579 Gene.

No data available for External Links for LOC105369579 Gene

Products for LOC105369579 Gene

Sources for LOC105369579 Gene

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