Aliases for LOC105369578 Gene

Data sources for LOC105369578 Gene:

Subcategory (RNA class) for LOC105369578 Gene

ncRNA

Aliases for LOC105369578 Gene

External Ids for LOC105369578 Gene

Previous GeneCards Identifiers for LOC105369578 Gene

  • GC11U902516

Summaries for LOC105369578 Gene

GeneCards Summary for LOC105369578 Gene

LOC105369578 (Uncharacterized LOC105369578) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369578 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105369578 Gene

Genomics for LOC105369578 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105369578 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J131186 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 250.7 +0.2 221 2.2 SP1 BCL11A POLR2A CBFB TAF1 SPI1 BHLHE40 BATF ELF1 IKZF1 ENSG00000236129 HSALNG0088272 LOC105369578 LOC107984412 lnc-NTM-4 NTM SNX19
GH11J131178 Enhancer 0.3 Ensembl ENCODE 0.4 +8.1 8121 0.8 LOC105369578 HSALNG0088272 lnc-NTM-4 NTM SNX19
GH11J131179 Enhancer 0.3 Ensembl ENCODE 0.4 +6.9 6921 1.2 LOC105369578 HSALNG0088272 lnc-NTM-4 NTM SNX19
GH11J131180 Enhancer 0.2 Ensembl 0.4 +5.8 5821 0.6 LOC105369578 HSALNG0088272 lnc-NTM-4 NTM SNX19
GH11J131121 Enhancer 0.3 Ensembl 0.2 +64.9 64922 0.4 REST lnc-NTM-4 LOC105369578 SNX19 NTM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369578 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105369578 Gene

Latest Assembly
chr11:131,175,563-131,186,722
(GRCh38/hg38)
Size:
11,160 bases
Orientation:
Minus strand

Genomic View for LOC105369578 Gene

Genes around LOC105369578 on UCSC Golden Path with GeneCards custom track
LOC105369578 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105369578 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369578 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369578 Gene

Proteins for LOC105369578 Gene

Post-translational modifications for LOC105369578 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369578 Gene

Domains & Families for LOC105369578 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105369578 Gene

Function for LOC105369578 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369578 Gene

Localization for LOC105369578 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369578 Gene

Pathways & Interactions for LOC105369578 Gene

PathCards logo

SuperPathways for LOC105369578 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105369578 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105369578 Gene

Drugs & Compounds for LOC105369578 Gene

No Compound Related Data Available

Transcripts for LOC105369578 Gene

LOC105369578 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369578 Gene

No ASD Table

Relevant External Links for LOC105369578 Gene

GeneLoc Exon Structure for
LOC105369578

No data available for mRNA/cDNA for LOC105369578 Gene

Expression for LOC105369578 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369578 Gene

Orthologs for LOC105369578 Gene

No data available for Orthologs and Evolution for LOC105369578 Gene

Paralogs for LOC105369578 Gene

No data available for Paralogs for LOC105369578 Gene

Variants for LOC105369578 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105369578 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369578 Gene

Disorders for LOC105369578 Gene

No disorders were found for LOC105369578 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369578 Gene

Publications for LOC105369578 Gene

No publications were found for LOC105369578 Gene.

No data available for Mastermind for LOC105369578 Gene

Products for LOC105369578 Gene

Sources for LOC105369578 Gene