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Aliases for LOC105369572 Gene

Subcategory (RNA class) for LOC105369572 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369572 Gene

  • Uncharacterized LOC105369572 3

External Ids for LOC105369572 Gene

Previous GeneCards Identifiers for LOC105369572 Gene

  • GC11U902708

Summaries for LOC105369572 Gene

GeneCards Summary for LOC105369572 Gene

LOC105369572 (Uncharacterized LOC105369572) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369572 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369572 Gene

Genomics for LOC105369572 Gene

GeneHancer (GH) Regulatory Elements for LOC105369572 Gene

Promoters and enhancers for LOC105369572 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J129332 Enhancer 0.8 ENCODE 600.7 -0.8 -786 0.2 CTCF ZNF384 RAD21 KAT8 RXRA ZIC2 GATAD2A TRIM22 IRF2 SOX13 LOC105369572 GC11M129330 ARHGAP32 BARX2
GH11J129331 Enhancer 0.3 FANTOM5 600.7 0.0 -46 0.2 TEAD3 LOC105369572 GC11M129330 ARHGAP32
GH11J129323 Enhancer 0.9 ENCODE 0.4 +6.9 6867 1.9 ELF3 CEBPG NCOA3 SP1 HNF1A PPARG ZNF644 KAT8 CREB1 RXRA ARHGAP32 GC11M129325 LOC105369572 LOC105369571
GH11J129326 Enhancer 0.5 Ensembl 0.7 +3.9 3914 1.8 RXRA SP1 ZNF610 HNF4A CTCF GC11M129325 ARHGAP32 LOC105369572 LOC105369571
GH11J129314 Enhancer 0.6 ENCODE 0.4 +14.6 14648 3.3 CTBP1 ZFX TCF7 RFX1 PKNOX1 ZNF217 DPF2 GATA3 CTCF NR2F6 ARHGAP32 LOC105369571 LOC105369572 GC11M129325
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369572 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369572 Gene

Genomic Locations for LOC105369572 Gene
chr11:129,307,296-129,331,215
(GRCh38/hg38)
Size:
23,920 bases
Orientation:
Minus strand

Genomic View for LOC105369572 Gene

Genes around LOC105369572 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369572 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369572 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369572 Gene

Proteins for LOC105369572 Gene

Post-translational modifications for LOC105369572 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369572 Gene

Domains & Families for LOC105369572 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369572 Gene

Function for LOC105369572 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369572 Gene

Localization for LOC105369572 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369572 Gene

Pathways & Interactions for LOC105369572 Gene

PathCards logo

SuperPathways for LOC105369572 Gene

No Data Available

Interacting Proteins for LOC105369572 Gene

Gene Ontology (GO) - Biological Process for LOC105369572 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369572 Gene

Drugs & Compounds for LOC105369572 Gene

No Compound Related Data Available

Transcripts for LOC105369572 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369572 Gene

No ASD Table

Relevant External Links for LOC105369572 Gene

GeneLoc Exon Structure for
LOC105369572

No data available for mRNA/cDNA for LOC105369572 Gene

Expression for LOC105369572 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369572 Gene

Orthologs for LOC105369572 Gene

No data available for Orthologs and Evolution for LOC105369572 Gene

Paralogs for LOC105369572 Gene

No data available for Paralogs for LOC105369572 Gene

Variants for LOC105369572 Gene

Sequence variations from dbSNP and Humsavar for LOC105369572 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000056668 -- 129,315,622(-) G/A intron_variant
rs1000166030 -- 129,309,835(-) G/A intron_variant
rs1000171501 -- 129,315,820(-) A/C intron_variant
rs1000215010 -- 129,312,654(-) C/T intron_variant
rs1000401575 -- 129,318,860(-) C/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369572 Gene

Disorders for LOC105369572 Gene

No disorders were found for LOC105369572 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369572 Gene

Publications for LOC105369572 Gene

No publications were found for LOC105369572 Gene.

No data available for External Links for LOC105369572 Gene

Products for LOC105369572 Gene

Sources for LOC105369572 Gene

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