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Aliases for LOC105369568 Gene

Subcategory (RNA class) for LOC105369568 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369568 Gene

  • Uncharacterized LOC105369568 3

External Ids for LOC105369568 Gene

Previous GeneCards Identifiers for LOC105369568 Gene

  • GC11U902510

Summaries for LOC105369568 Gene

GeneCards Summary for LOC105369568 Gene

LOC105369568 (Uncharacterized LOC105369568) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369568 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369568 Gene

Genomics for LOC105369568 Gene

GeneHancer (GH) Regulatory Elements for LOC105369568 Gene

Promoters and enhancers for LOC105369568 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J128619 Enhancer 0.7 FANTOM5 dbSUPER 600.7 +1.8 1817 0.4 ZNF639 ZNF766 FOSL1 NR2F1 LOC105369568 ETS1-AS1 GC11M128616 ENSG00000245008
GH11J128620 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.0 -4048 10.8 CTCF CBFA2T2 ZNF687 RELA SP1 MLLT1 ZNF639 RAD21 IKZF1 RXRA FLI1 ETS1 SENCR ETS1-AS1 LOC105369568 GC11P128667 ENSG00000245008
GH11J128607 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.8 10821 6.8 SP1 ZNF687 CREM MLLT1 IKZF1 POLR2A BACH1 IKZF2 RELA ZNF143 ETS1-AS1 ETS1 FLI1 GC11M128616 LOC105369568 ENSG00000245008
GH11J128632 Enhancer 0.7 ENCODE dbSUPER 0.4 -10.4 -10422 0.2 CTCF RAD21 SMC3 PRDM4 IRF4 ZNF654 FLI1 SENCR ETS1-AS1 LOC105369568 GC11P128667 ENSG00000245008
GH11J128617 Enhancer 0.3 dbSUPER 0.7 +4.6 4601 0.5 PRDM1 ETS1-AS1 C11orf45 LOC105369568 GC11M128616 ENSG00000245008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369568 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369568 Gene

Genomic Locations for LOC105369568 Gene
chr11:128,610,399-128,621,889
(GRCh38/hg38)
Size:
11,491 bases
Orientation:
Minus strand

Genomic View for LOC105369568 Gene

Genes around LOC105369568 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369568 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369568 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369568 Gene

Proteins for LOC105369568 Gene

Post-translational modifications for LOC105369568 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369568 Gene

Domains & Families for LOC105369568 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369568 Gene

Function for LOC105369568 Gene

Phenotypes From GWAS Catalog for LOC105369568 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369568 Gene

Localization for LOC105369568 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369568 Gene

Pathways & Interactions for LOC105369568 Gene

PathCards logo

SuperPathways for LOC105369568 Gene

No Data Available

Interacting Proteins for LOC105369568 Gene

Gene Ontology (GO) - Biological Process for LOC105369568 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369568 Gene

Drugs & Compounds for LOC105369568 Gene

No Compound Related Data Available

Transcripts for LOC105369568 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369568 Gene

No ASD Table

Relevant External Links for LOC105369568 Gene

GeneLoc Exon Structure for
LOC105369568

No data available for mRNA/cDNA for LOC105369568 Gene

Expression for LOC105369568 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369568 Gene

Orthologs for LOC105369568 Gene

No data available for Orthologs and Evolution for LOC105369568 Gene

Paralogs for LOC105369568 Gene

No data available for Paralogs for LOC105369568 Gene

Variants for LOC105369568 Gene

Sequence variations from dbSNP and Humsavar for LOC105369568 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000021011 -- 128,622,213(-) G/A genic_upstream_transcript_variant, non_coding_transcript_variant, upstream_transcript_variant
rs1000086973 -- 128,618,676(-) C/A intron_variant
rs1000248118 -- 128,612,827(-) T/C genic_downstream_transcript_variant, intron_variant
rs1000260217 -- 128,608,096(-) C/G genic_downstream_transcript_variant, intron_variant
rs1000332905 -- 128,600,815(-) A/C genic_downstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369568 Gene

Disorders for LOC105369568 Gene

No disorders were found for LOC105369568 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369568 Gene

Publications for LOC105369568 Gene

No publications were found for LOC105369568 Gene.

No data available for External Links for LOC105369568 Gene

Products for LOC105369568 Gene

Sources for LOC105369568 Gene

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