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Aliases for LOC105369545 Gene

Subcategory (RNA class) for LOC105369545 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369545 Gene

  • Uncharacterized LOC105369545 3

External Ids for LOC105369545 Gene

Previous GeneCards Identifiers for LOC105369545 Gene

  • GC11U902389

Summaries for LOC105369545 Gene

GeneCards Summary for LOC105369545 Gene

LOC105369545 (Uncharacterized LOC105369545) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369545 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369545 Gene

Genomics for LOC105369545 Gene

GeneHancer (GH) Regulatory Elements for LOC105369545 Gene

Promoters and enhancers for LOC105369545 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J124086 Enhancer 0.4 FANTOM5 600.7 -0.1 -80 0.2 RFX1 POLR2A LOC105369545 VWA5A TMEM225 SCN3B OR6M1 OR8D1 OR10D4P
GH11J124078 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 +6.6 6610 3.3 CC2D1A ZKSCAN8 CBFA2T2 MLLT1 BACH1 TRIM24 ZNF639 SMARCA4 MTA1 CAVIN1 VWA5A ZNF202 SPA17 OR8G2P OR8B12 OR8D1 OR8A1 LOC105369545 GC11M124060
GH11J124070 Enhancer 1 FANTOM5 ENCODE 0.4 +15.5 15491 0.9 SP1 CC2D1A CTCF RELA CREM MLLT1 RAD21 ZBED1 IKZF1 ARID2 VWA5A OR8B12 OR8G2P GC11M124060 LOC105369545
GH11J124069 Enhancer 0.8 ENCODE 0.4 +17.1 17091 0.2 CC2D1A CTCF GTF2F1 NCOA6 RAD21 ATF1 REST ZSCAN4 HDAC1 ZNF24 GC11M124060 VWA5A LOC105369545
GH11J124075 Enhancer 0.7 ENCODE 0.4 +10.1 10137 1.2 GLIS2 ZNF600 ZNF692 RUNX3 ZBTB48 ZBTB17 ZFHX2 ZFP69B ZNF610 ZNF335 GC11M124060 LOC105369545
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369545 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369545 Gene

Genomic Locations for LOC105369545 Gene
chr11:124,082,358-124,086,660
(GRCh38/hg38)
Size:
4,303 bases
Orientation:
Minus strand

Genomic View for LOC105369545 Gene

Genes around LOC105369545 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369545 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369545 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369545 Gene

Proteins for LOC105369545 Gene

Post-translational modifications for LOC105369545 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369545 Gene

Domains & Families for LOC105369545 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369545 Gene

Function for LOC105369545 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369545 Gene

Localization for LOC105369545 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369545 Gene

Pathways & Interactions for LOC105369545 Gene

PathCards logo

SuperPathways for LOC105369545 Gene

No Data Available

Interacting Proteins for LOC105369545 Gene

Gene Ontology (GO) - Biological Process for LOC105369545 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369545 Gene

Drugs & Compounds for LOC105369545 Gene

No Compound Related Data Available

Transcripts for LOC105369545 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369545 Gene

No ASD Table

Relevant External Links for LOC105369545 Gene

GeneLoc Exon Structure for
LOC105369545

No data available for mRNA/cDNA for LOC105369545 Gene

Expression for LOC105369545 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369545 Gene

Orthologs for LOC105369545 Gene

No data available for Orthologs and Evolution for LOC105369545 Gene

Paralogs for LOC105369545 Gene

No data available for Paralogs for LOC105369545 Gene

Variants for LOC105369545 Gene

Sequence variations from dbSNP and Humsavar for LOC105369545 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000576648 -- 124,087,770(-) G/A upstream_transcript_variant
rs1000693161 -- 124,087,985(-) T/G upstream_transcript_variant
rs1000753786 -- 124,082,244(-) G/A downstream_transcript_variant
rs1000964971 -- 124,082,102(-) A/G downstream_transcript_variant
rs1001207489 -- 124,082,060(-) T/C downstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369545 Gene

Disorders for LOC105369545 Gene

No disorders were found for LOC105369545 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369545 Gene

Publications for LOC105369545 Gene

No publications were found for LOC105369545 Gene.

No data available for External Links for LOC105369545 Gene

Products for LOC105369545 Gene

Sources for LOC105369545 Gene

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