Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105369544 Gene

Subcategory (RNA class) for LOC105369544 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105369544 Gene

  • Uncharacterized LOC105369544 3

External Ids for LOC105369544 Gene

Previous GeneCards Identifiers for LOC105369544 Gene

  • GC11U902390

Summaries for LOC105369544 Gene

GeneCards Summary for LOC105369544 Gene

LOC105369544 (Uncharacterized LOC105369544) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369544 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369544 Gene

Genomics for LOC105369544 Gene

GeneHancer (GH) Regulatory Elements for LOC105369544 Gene

Promoters and enhancers for LOC105369544 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J123798 Enhancer 0.5 ENCODE 600.7 +1.4 1413 0.1 SP1 CEBPB ATF3 HNF4A RXRA MAX HNF4G LOC105369544 OR6M1
GH11J123796 Enhancer 0.4 Ensembl ENCODE 600.7 0.0 -35 1.3 LOC105369544 OR6X1 RNU1-21P
GH11J123797 Enhancer 0.2 FANTOM5 600.7 -1.1 -1140 0.2 LOC105369544 OR6X1 OR6M1 OR6T1 RNU1-21P
GH11J123799 Enhancer 0.6 Ensembl ENCODE 0.7 +3.2 3237 3.1 POLR2A RAD51 ZNF202 TMEM225 LOC105369544 OR6M1
GH11J123773 Enhancer 0.8 ENCODE dbSUPER 0.3 -21.2 -21168 4.6 SP1 MAFK ZNF316 USF1 ETS1 ZNF143 ZNF558 PRDM10 NANOG POU5F1 ZNF202 OR6X1 OR6M1 TMEM225 OR8D4 RNU1-21P LOC105369544
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105369544 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369544 Gene

Genomic Locations for LOC105369544 Gene
chr11:123,797,387-123,817,027
(GRCh38/hg38)
Size:
19,641 bases
Orientation:
Plus strand

Genomic View for LOC105369544 Gene

Genes around LOC105369544 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369544 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369544 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369544 Gene

Proteins for LOC105369544 Gene

Post-translational modifications for LOC105369544 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369544 Gene

Domains & Families for LOC105369544 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369544 Gene

Function for LOC105369544 Gene

Phenotypes From GWAS Catalog for LOC105369544 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369544 Gene

Localization for LOC105369544 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369544 Gene

Pathways & Interactions for LOC105369544 Gene

PathCards logo

SuperPathways for LOC105369544 Gene

No Data Available

Interacting Proteins for LOC105369544 Gene

Gene Ontology (GO) - Biological Process for LOC105369544 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369544 Gene

Drugs & Compounds for LOC105369544 Gene

No Compound Related Data Available

Transcripts for LOC105369544 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369544 Gene

No ASD Table

Relevant External Links for LOC105369544 Gene

GeneLoc Exon Structure for
LOC105369544

No data available for mRNA/cDNA for LOC105369544 Gene

Expression for LOC105369544 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369544 Gene

Orthologs for LOC105369544 Gene

No data available for Orthologs and Evolution for LOC105369544 Gene

Paralogs for LOC105369544 Gene

No data available for Paralogs for LOC105369544 Gene

Variants for LOC105369544 Gene

Sequence variations from dbSNP and Humsavar for LOC105369544 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000124342 -- 123,813,622(+) G/A/T intron_variant
rs1000322643 -- 123,801,350(+) T/C intron_variant
rs1000486803 -- 123,795,447(+) T/G upstream_transcript_variant
rs1000506631 -- 123,812,018(+) T/C intron_variant
rs1000561380 -- 123,804,721(+) A/G intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105369544 Gene

Disorders for LOC105369544 Gene

No disorders were found for LOC105369544 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369544 Gene

Publications for LOC105369544 Gene

No publications were found for LOC105369544 Gene.

No data available for External Links for LOC105369544 Gene

Products for LOC105369544 Gene

Sources for LOC105369544 Gene

Content
Loading form....